Job Description P12281 Confidence 99.96% Date Thu Jan 5 11:33:06 GMT 2012 Rank 20 Aligned Residues 131 % Identity 24% Template c3kbqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein ta0487; PDBTitle: the crystal structure of the protein cina with unknown function from2 thermoplasma acidophilum Resolution 2.00 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	L	F	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	A	A	F	I	E	A	D	S	Q	A	D	V	V	I	S	S	G	G	V	S	V	G	E	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		N	A	S	V	I	T	V	G	N	E	I	L	K	.	.	.	.	.	.	.	G	R	T	V	N	T	N	A	A	F	I	G	N	F	L	T	Y	H	G	Y	Q	V	R	R	G	F	V	V	M	D	D	L	D	E	I	G	W	A	F	R	V	A	L	E	V	S	D	L	V	V	S	S	G	G	L	G	P	T	F	D
Template Known Secondary structure														T	.	.	.	.	.	.	.	T	S	S															T	T											S																	S						S			S	S	S	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.								.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.												270	.	.	.	.	.	.	.	.	.	280	.	.																					.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	T	K	T	I	L	E	E	L	G	.	.	.	.	.	.	.	.	.	.	.	E	I	A	F	W	K	L	A	I	K	P	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	A	F	G	K	L	S	N	S	W	F	C	G	L	P	G	N	P	V	S	A	T	L	T
Query Conservation													.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	M	T	V	E	G	F	A	K	C	I	G	Q	D	L	R	I	D	E	D	A	L	A	M	I	K	K	K	Y	G	L	T	P	Q	R	L	K	M	A	K	I	P	P	S	C	R	P	I	E	N	P	V	G	T	A	P	G	L	I	C	A	V	G	G	K	K	V	I	I	L	P	G	V	P	K	E	M	E	A	L
Template Known Secondary structure													T																									G	G	G				T	T							S	S	S	S	S								T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		308	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	Q	L	V	Q	P	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	A	M	E	K	D	I	I
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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