Return to main results Retrieve Phyre Job Id

Job DescriptionP12281
Confidence42.73%DateThu Jan 5 11:33:06 GMT 2012
Rank251Aligned Residues82
% Identity21%Templatec3hbmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:udp-sugar hydrolase; PDBTitle: crystal structure of pseg from campylobacter jejuni
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   176...180.........190.........200.........210.........220.........230...... ...240
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Query Sequence  RKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAA. . . . . . . . . . . . . . . FIEA
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Template Sequence  KKKYDFFICXG. . . . . . . . . . . . GTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKL
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TT
S
TTS

TT
TTT
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S
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   155....160..... ....170.........180.........190.........200.........210.........220..
 
   241........250.........260.........270.........280.........290........
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Query Sequence  DSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLP
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Template Sequence  XNESNKLIISASSL. . . . . . VNEALL. . . . . . . . . . . . . . . . . . . . . . . LKANFKAIC
Template Known Secondary structure  TSS.............................TT


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   223......230...... ...240.. .......250.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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