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Job DescriptionP12281
Confidence75.12%DateThu Jan 5 11:33:06 GMT 2012
Rank92Aligned Residues92
% Identity18%Templatec3cq9C_
PDB info PDB header:transferaseChain: C: PDB Molecule:uncharacterized protein lp_1622; PDBTitle: crystal structure of the lp_1622 protein from lactobacillus2 plantarum. northeast structural genomics consortium target3 lpr114
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   202.......210.........220.........230.........240... ......250.........260.........270.........
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Query Sequence  YDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQ. . ADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIK
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Template Sequence  FDSIDAAELQTVKDALVGAIVVKPDQDHTDT. QLAIKSIFEQLQPDEVHLYGATGG. RLDHLLANXW. . . . LVLDPVFRQ
Template Known Secondary structure 
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.T

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T....GGGSTTGGG
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   51........60.........70.........80. ........90.........100..... ....110..... ....120....
 
   280.........290.........
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Query Sequence  PGKPFAFGKLSNSWFCGLPG
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Template Sequence  WAPQIKLIDKQNSVRFFLPG
Template Known Secondary structure  GGGGTT
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   125....130.........140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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