Job Description P12281 Confidence 92.64% Date Thu Jan 5 11:33:06 GMT 2012 Rank 35 Aligned Residues 95 % Identity 26% Template c3c7cB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:octopine dehydrogenase; PDBTitle: a structural basis for substrate and stereo selectivity in2 octopine dehydrogenase (odh-nadh-l-arginine) Resolution 3.10 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	L	F	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	.	L	G	C	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	A	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	C	V	C	G	G	G	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	T	L	S	G	L	A	A	S	R	D	G	V	E	V	R	V	L	T	L	F	A	D	E	A	E	R	W	T	K	A	L	G	A	D	E	L	T	V	I	V	N	E	K	D	G	T	Q	T	E	V	K
Template Known Secondary structure									S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S	T	T									S	T	T										T	T	S									T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.																		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
												238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	I	E	A	D	S	Q	A	D	V	V	I	S	S	G	G	V	S	V	G	E	A	D	Y	T	K	T	I	L	E	E	L	G	E	I	A	F	W	K	L	A	I	K	P	G	K	P	F	A	F	G	K	L	S	N	S	W	F	C	G	L	P	G	N	P	V	S	A	T	L	T
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	P	K	V	I	T	K	D	P	E	I	A	I	S	G	A	D	V	V	I	L	T	V	.	.	.	.	.	P	A	F	A	H	E	G	Y	F	Q	A	M	A	P	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	S	A	L	I	V	G	L	P	S	Q	A	G	F	E	F	Q	C
Template Known Secondary structure					S				S							T	T		S						S	.	.	.	.	.		G	G	G									T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T						T	T			S	S
Template Predicted Secondary structure																										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		308	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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