Return to main results Retrieve Phyre Job Id

Job DescriptionP12281
Confidence20.35%DateThu Jan 5 11:33:06 GMT 2012
Rank420Aligned Residues63
% Identity17%Templatec3b9bA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: structure of the e2 beryllium fluoride complex of the serca2 ca2+-atpase
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100.........110... ......120.........130.. .......140.......
Predicted Secondary structure 



















........






..........














Query SS confidence 



























. . . . . . . .


















. . . . . . . . . .














Query Sequence  YHGEWPAGTCIRIMTGAPVPEGCEAVVM. . . . . . . . QEQTEQMDNGVRFTAEVRS. . . . . . . . . . GQNIRRRGEDISAGA
Query Conservation      
  
 

 
 


 

 





 ........ 
        
 
      ..........
 


  


   
 
Alig confidence 



















..





........


















..........














Template Conservation      

 



 
  
  

..

 


 
      



 




 

 
                
 
 


 
  
 
Template Sequence  KARDIVPGDIVEVAVGDKVP. . ADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGK
Template Known Secondary structure  GGG

TT
TT
B

..S
SS




SS



S



SS

TTT
TT
TT

Template Predicted Secondary structure 








..


































Template SS confidence 















































































   141........150.........160 .........170.........180.........190.........200.........210........
 
   148.150
Predicted Secondary structure 
Query SS confidence 


Query Sequence  VVF
Query Conservation   

Alig confidence 


Template Conservation     
Template Sequence  ALG
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   219220.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions