Return to main results Retrieve Phyre Job Id

Job DescriptionP12281
Confidence42.07%DateThu Jan 5 11:33:06 GMT 2012
Rank256Aligned Residues82
% Identity11%Templatec3a9rA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-arabinose isomerase; PDBTitle: x-ray structures of bacillus pallidus d-arabinose2 isomerasecomplex with (4r)-2-methylpentane-2,4-diol
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   174.....180.........190.........200.........210..... ....220.........230.........240.. ....
Predicted Secondary structure 















......





.


Query SS confidence 









































. . . . . .


























.



Query Sequence  VIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQ. . . . . . LGCEVINLGIIRDDPHALRAAFIEADS. QADV
Query Conservation 
   


 







   
     
 
 



  
 
 
  ...... 
  
     
 

   
   
  
  .  

Alig confidence 









































......


























.



Template Conservation     





   



 
 

  

  
       
  
     
     

 
 

 

    

  
  

   


 
Template Sequence  VGNLPKIGIRPTIDGRRKGVRESLEETTMNMAKAVAKLLEENVFYYNGQPVECVIADTCIGGVKEAAEAAEKFAREGVGV
Template Known Secondary structure  SSB

B



TTTTTTTT
B
TTS
B


SS
B
ST
Template Predicted Secondary structure 



























Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   247..250.....
Predicted Secondary structure 




Query SS confidence 








Query Sequence  VISSGGVSV
Query Conservation 





 
 
Alig confidence 








Template Conservation 

     
 
Template Sequence  SITVTPCWC
Template Known Secondary structure  SS

Template Predicted Secondary structure 
Template SS confidence 








   88.90......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions