Job Description P12281 Confidence 27.43% Date Thu Jan 5 11:33:06 GMT 2012 Rank 357 Aligned Residues 62 % Identity 15% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	R	V	A	L	F	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	.	.	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	A	A	F	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	C	K	I	T	V	V	G	V	G	D	.	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	L	V	D	A	D	T	D	K	L	R	G	E	A	L	D	L	Q	H	G	S	L	F	L	S	T	P	K	I	V	F	G	K
Template Known Secondary structure												S		.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T	S		S							S															T	T	T	T		S								S
Template Predicted Secondary structure														.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.		30																	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	D	S	Q	A	D	V	V	I	S	S	G	G	V	S
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		D	Y	N	V	S	A	N	S	K	L	V	I	I	T	A	G	A	R
Template Known Secondary structure		S	G	G	G	G	T	T									S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions