Job Description P12281 Confidence 24.08% Date Thu Jan 5 11:33:06 GMT 2012 Rank 384 Aligned Residues 99 % Identity 28% Template c2hjrK_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of cryptosporidium parvum malate2 dehydrogenase Resolution 2.20 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	R	V	A	L	F	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	.	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	A	A	F	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.														.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.
Template Sequence		R	K	K	I	S	I	I	G	A	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	I	.	.	.	.	G	S	T	I	A	L	L	L	G	Q	K	D	L	G	D	V	Y	M	F	D	I	I	E	G	V	P	Q	G	K	A	L	D	L	N	H	C	M	A	L	I	G	S	P	A	K	I	F	G	E	N	N
Template Known Secondary structure											S		.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.											T	T		S							S	S	T	T																	T									S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.														.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.												.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure		.	.																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	A	D	S	Q	A	D	V	V	I	S	S	G	G	V	S	V	G	E	.	.	.	.	.	.	.	.	.	.	.	A	D	Y	T	K	T	I	L	E	E	L	G	E	I	A	F	W	K	L	A	I	K	P	G	K	P	F	A	F	G	K	L	S	N	S	W	F	C	G	L	P	G	N	P	V	S	A	T	L
Query Conservation		.	.																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																			.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	E	Y	L	Q	N	S	D	V	V	I	I	T	A	G	V	P	R	K	P	N	M	T	R	S	D	L	L	T	V	N	A	K	I	V	G	S	V	A	E	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	Y	C	P	N	A	F	V	I	C	I	T	N	P	L	D	A	M	V
Template Known Secondary structure		G	G	G	G	T	T		S							S					T	T			S	G	G	G																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S							S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		307	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Y	F	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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