Job Description P12281 Confidence 52.38% Date Thu Jan 5 11:33:06 GMT 2012 Rank 196 Aligned Residues 134 % Identity 16% Template c2bruB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase subunit alpha; PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase Resolution UNK

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	R	V	A	L	F	S	T	G	D	E	L	Q	L	P	G	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	A	K	V	M	V	I	G	A	G	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	T	R	P	E	V	K	E	Q	V	Q	S	M	G	A	E	F	L	E	L	D	M	S	D	A	F	I	K	A	E	M	E
Template Known Secondary structure										S	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T								S	S	T									T	T										T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1164	.	.	.	.	.	1170	.	.	.	.	.	.																		.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.
			237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.								.	.	.	.	290	.	.	.	.	.	.	.	.	.	300					.
Predicted Secondary structure		.																		.	.																	.																	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence		.																		.	.																	.																	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		.	F	I	E	A	D	S	Q	A	D	V	V	I	S	S	G	G	V	.	.	S	V	G	E	A	D	Y	T	K	T	I	L	E	E	L	G	.	E	I	A	F	W	K	L	A	I	K	P	G	K	P	F	A	.	.	.	.	.	.	.	F	G	K	L	S	N	S	W	F	C	G	L	P	G	N	.	.	.	.	P
Query Conservation		.																		.	.																	.																	.	.	.	.	.	.	.																.	.	.	.
Alig confidence		.																		.	.																	.																	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		L	F	A	A	Q	A	K	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R	E	M	V	D	S	M	K	A	G	S	V	I	V	D	L	A	A	Q	N	G	G	N	C	E	Y	T	V	P	G	E	I	F	T	T	E	N	G	V	K	V	I	G	Y	T	D	L	P	G	R	L	P
Template Known Secondary structure											S								B	T	T	B						B						T	T	S		S	S						S	T	T	T	T	T		S	B	S	S			T	T	S					S	S	S							T	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		1241	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	T	L	T	F	Y	Q	L	V	Q	P	L	L	A	K	L	S	G	N	T	A	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	S	S	Q	L	Y	G	T	N	L	V	N	L	L	K	L	L	C	K	E	K	D	G	N
Template Known Secondary structure																				S	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		1321	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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