Job Description P12281 Confidence 100.00% Date Thu Jan 5 11:33:06 GMT 2012 Rank 4 Aligned Residues 372 % Identity 30% Template c1wu2B_ PDB info PDB header:structural genomics,biosynthetic protein Chain: B: PDB Molecule:molybdopterin biosynthesis moea protein; PDBTitle: crystal structure of molybdopterin biosynthesis moea2 protein from pyrococcus horikoshii ot3 Resolution 2.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		G	L	M	S	L	D	T	A	L	N	E	M	L	S	R	V	T	P	L	T	A	Q	E	T	L	P	L	V	Q	C	F	G	R	I	L	A	S	D	V	V	S	P	L	D	V	P	G	F	D	N	S	A	M	D	G	Y	A	V	R	L	A	D	I	A	S	G	Q	P	.	.	.	.	.	L	P	V	A	G	K	S
Query Conservation																																																																						.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.
Template Conservation
Template Sequence		K	L	V	P	Y	R	E	A	L	K	L	L	L	D	D	I	N	E	I	E	D	T	E	K	V	P	L	R	E	A	V	G	R	V	L	A	E	D	I	V	T	E	F	D	I	P	P	F	D	R	A	A	V	D	G	Y	A	I	R	A	E	D	T	F	Q	A	R	E	Y	N	P	I	E	L	T	V	I	E	E	V
Template Known Secondary structure				B																								G	G	G		T	T		B	B	S	S					S	S		B	S	S	S				S	S	S						G	G	G	G	T	T		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	G	Q	P	Y	H	G	E	W	P	A	G	T	C	I	R	I	M	T	G	A	P	V	P	E	G	C	E	A	V	V	M	Q	E	Q	T	E	Q	M	D	N	G	V	R	F	T	A	E	V	R	S	G	Q	N	I	R	R	R	G	E	D	I	S	A	G	A	V	V	F	P	A	G	T	R	L	T	T	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	G	N	V	A	K	E	E	V	T	T	G	K	A	I	K	V	L	T	G	T	R	I	P	K	G	A	N	A	V	I	X	Q	E	X	V	K	R	E	G	D	K	I	Y	V	L	R	P	V	A	P	G	Q	N	I	A	F	T	G	E	D	V	K	K	G	E	V	V	L	R	K	G	T	I	L	R	P	Q	D
Template Known Secondary structure			T	T				S	S				T	T							T	T		B			T	T							G	G	G	S				S	S						S				T	T	T	T				T	T	S	S	B		T	T						T	T		B
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		L	P	V	I	A	S	L	G	I	A	E	V	P	V	I	R	K	V	R	V	A	L	F	S	T	G	D	E	L	Q	L	P	G	.	.	Q	P	L	G	D	G	Q	I	Y	D	T	N	R	L	A	V	H	L	M	L	E	Q	L	G	C	E	V	I	N	L	G	I	I	R	D	D	P	H	A	L	R	A	A	F	I
Query Conservation																																			.	.
Alig confidence																																			.	.
Template Conservation
Template Sequence		V	A	X	L	K	A	L	G	I	K	K	V	P	V	K	V	K	P	K	V	G	I	I	I	T	G	S	E	L	I	E	E	P	S	E	E	G	F	K	E	G	K	I	V	E	T	N	S	I	X	L	Q	G	L	V	E	K	F	F	G	E	P	I	L	Y	G	V	L	P	D	D	E	S	I	I	K	E	T	L	E
Template Known Secondary structure								T	T		S																	T	T			S		T	T	S	T					T																	T	T											S	S	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	D	S	Q	A	D	V	V	I	S	S	G	G	V	S	V	G	E	A	D	Y	T	K	T	I	L	E	E	L	G	E	I	A	F	W	K	L	A	I	K	P	G	K	P	F	A	F	G	K	L	S	N	S	W	F	C	G	L	P	G	N	P	V	S	A	T	L	T	F	Y	Q	L	V	Q	P	L	L	A	K
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		K	A	K	N	E	C	D	I	V	L	I	T	G	F	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	F	H	G	T	T	I	K	P	G	R	P	F	G	Y	G	.	.	.	.	E	K	V	F	I	X	S	G	Y	P	V	S	V	F	A	Q	F	N	L	F	V	K	H	A	L	A	K
Template Known Secondary structure								S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S				B	S			S		T	T					.	.	.	.	T	T						S	S											T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.																	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	G	N	T	A	S	G	L	P	A	R	Q	R	V	R	T	A	S	R	L	K	K	T	P	G	R	L	D	F	Q	R	G	V	L	Q	R	N	A	D	G	E	L	E	V	T	T	T	G	H	Q	G	S	H	I	F	S	S	F	S	L	G	N	C	F	I	V	L	E	R	D	R	G	N	V	E	V	G	E	W
Query Conservation
Alig confidence										.	.																														.	.	.	.	.
Template Conservation										.	.																														.	.	.	.	.
Template Sequence		X	V	G	A	Q	N	Y	E	.	.	V	K	V	K	A	I	L	Q	D	D	I	P	S	Q	L	G	R	Y	E	F	I	K	I	Y	Y	E	N	G	I	.	.	.	.	.	A	R	V	I	K	K	K	G	S	G	I	L	S	S	L	L	A	S	N	A	Y	L	E	I	P	E	D	S	E	G	Y	R	R	G	E	E
Template Known Secondary structure				T			S		S	.	.								S	S						T	T											T	T		.	.	.	.	.									S	S		S					S		S							T	T						T	T
Template Predicted Secondary structure										.	.																														.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.						.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		399	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	E	P	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	W	I	T	L	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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