Job Description P30125 Confidence 100.00% Date Thu Jan 5 11:45:46 GMT 2012 Rank 16 Aligned Residues 325 % Identity 36% Template d1wpwa_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 2.80

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	I	A	V	L	P	G	D	G	I	G	P	E	V	M	T	Q	A	L	K	V	L	D	A	V	R	N	R	F	A	M	R	I	T	T	S	H	Y	D	V	G	G	A	A	I	D	N	H	G	Q	P	L	P	P	A	T	V	E	G	C	E	Q	A	D	A	V	L	F	G	S	V	G	G	P	K	W	E	H	L
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		F	T	V	A	L	I	Q	G	D	G	I	G	P	E	I	V	S	K	S	K	R	I	L	A	K	I	N	E	L	Y	S	L	P	I	E	Y	I	E	V	E	A	G	D	R	A	L	A	R	Y	G	E	A	L	P	K	D	S	L	K	I	I	D	K	A	D	I	I	L	K	G	P	V	G	E	S	A	.	.	.	.
Template Known Secondary structure										S	T	T																			T	T											S							S	S	S	S	S										T		S									T	T		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	D	Q	Q	P	E	R	G	A	L	L	P	L	R	K	H	F	K	L	F	S	N	L	R	P	A	K	L	Y	Q	G	L	E	A	F	C	P	L	R	A	D	I	A	A	N	G	F	D	I	L	C	V	R	E	L	T	G	G	I	Y	F	G	Q	P	K	G	R	E	G	S	G	Q	Y	E	K	A	F	D	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation		.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		.	.	.	.	.	.	.	A	D	V	V	V	K	L	R	Q	I	Y	D	M	Y	A	N	I	R	P	A	K	S	I	P	G	I	D	T	.	.	.	.	.	.	.	.	K	Y	G	N	V	D	I	L	I	V	R	E	N	T	E	D	L	Y	K	G	F	E	H	I	V	.	.	.	.	S	D	G	V	A	V	G	M
Template Known Secondary structure		.	.	.	.	.	.	.										T	T	T												T	T	T			.	.	.	.	.	.	.	.	S		S											S	S	B	T	T	T							.	.	.	.		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
									78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		E	V	Y	H	R	F	E	I	E	R	I	A	R	I	A	F	E	S	A	R	K	R	R	H	K	V	T	S	I	D	K	A	N	V	L	Q	.	S	S	I	L	W	R	E	I	V	N	E	I	A	T	E	Y	P	D	V	E	L	A	H	M	Y	I	D	N	A	T	M	Q	L	I	K	D	P	S	Q	F	D	V	L
Query Conservation																																						.
Alig confidence																																						.														.	.
Template Conservation																																																				.	.
Template Sequence		K	I	I	T	R	F	A	S	E	R	I	A	K	V	G	L	N	F	A	L	R	R	R	K	K	V	T	C	V	H	K	A	N	V	M	R	I	T	D	G	L	F	A	E	A	C	R	S	V	L	.	.	K	G	K	V	E	Y	S	E	M	Y	V	D	A	A	A	A	N	L	V	R	N	P	Q	M	F	D	V	I
Template Known Secondary structure			B																			T	T	T	S								T	T	T		T	T														.	.	T	T	T	S																		G	G	G		S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.								.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.
Query Sequence		L	C	S	N	L	F	G	D	I	L	S	D	E	C	A	M	I	T	G	S	M	G	M	L	P	S	A	S	L	N	E	Q	G	F	G	L	Y	E	P	A	G	G	S	A	P	D	I	A	G	K	N	I	A	N	P	I	A	Q	I	L	S	L	A	L	L	L	R	Y	S	L	D	.	.	.	.	.	.	.	A	D
Query Conservation																																																																									.	.	.	.	.	.	.
Alig confidence																																		.																																				.			.	.	.	.	.	.	.
Template Conservation																																		.																																				.
Template Sequence		V	T	E	N	V	Y	G	D	I	L	S	D	E	A	S	Q	I	A	G	S	L	G	I	A	P	S	A	N	I	G	D	K	.	K	A	L	F	E	P	V	H	G	A	A	F	D	I	A	G	K	N	I	G	N	P	T	A	F	L	L	S	V	S	M	M	Y	E	R	.	M	Y	E	L	S	N	D	D	R	Y	I
Template Known Secondary structure																				T		G	G	G								S	S	.							S	S				T	T	T	T	T	S	S				T														.				T	T			T
Template Predicted Secondary structure																																		.																																				.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		D	A	A	C	A	I	E	R	A	I	N	R	A	L	E	E	G	.	I	R	T	G	D	L	A	R	G	A	A	A	V	S	T	D	E	M	G	D	I	I	A	R	Y	V
Query Conservation																			.
Alig confidence																			.											.	.	.
Template Conservation																														.	.	.
Template Sequence		K	A	S	R	A	L	E	N	A	I	Y	L	V	Y	K	E	R	K	A	L	T	P	D	V	G	G	N	A	.	.	.	T	T	D	D	L	I	N	E	I	Y	N	K	L
Template Known Secondary structure																			S	S			G	G	G	T				.	.	.												S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions