Job Description P30125 Confidence 100.00% Date Thu Jan 5 11:45:46 GMT 2012 Rank 14 Aligned Residues 345 % Identity 29% Template d1hqsa_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 1.55

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		S	K	N	Y	H	I	A	V	L	P	G	D	G	I	G	P	E	V	M	T	Q	A	L	K	V	L	D	A	V	R	N	R	.	.	.	F	A	M	R	I	T	T	S	H	Y	D	V	G	G	A	A	I	D	N	H	G	Q	P	L	P	P	A	T	V	E	G	C	E	Q	A	D	A	V	L	F	G	S	V	G	G
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.
Template Conservation
Template Sequence		P	N	N	P	I	I	P	F	I	E	G	D	G	T	G	P	D	I	W	N	A	A	S	K	V	L	E	A	A	V	E	K	A	Y	K	G	E	K	K	I	T	W	K	E	V	Y	A	G	E	K	A	Y	N	K	T	G	E	W	L	P	A	E	T	L	D	V	I	R	E	Y	F	I	A	I	K	G	P	L	T	T
Template Known Secondary structure			S	S	B								S	T	T																					T	T	S											T								S		S	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		P	K	W	E	H	L	P	P	D	Q	Q	P	E	R	G	A	L	L	P	L	R	K	H	F	K	L	F	S	N	L	R	P	A	K	L	Y	Q	G	L	E	A	F	C	P	L	R	A	D	I	A	A	N	G	F	D	I	L	C	V	R	E	L	T	G	G	I	Y	F	G	Q	P	K	G	R	E	G	S	G	.	.
Query Conservation																																																																																.	.
Alig confidence								.	.	.	.	.	.	.																.																.	.	.	.	.																														.	.
Template Conservation								.	.	.	.	.	.	.																.																.	.	.	.	.
Template Sequence		P	V	G	G	G	I	.	.	.	.	.	.	.	R	S	L	N	V	A	L	R	Q	E	L	D	L	F	V	.	L	R	P	V	R	Y	F	T	G	V	P	S	P	V	K	.	.	.	.	.	R	P	E	D	T	D	M	V	I	F	R	E	N	T	E	D	I	Y	A	G	I	E	Y	A	K	G	S	E	E	V	Q
Template Known Secondary structure			S	S	S	S	S	.	.	.	.	.	.	.											T	T				.								T	T				S	S	S	.	.	.	.	.		G	G	G										S		G	G	G	G						T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.																.																.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
																			157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	E	K	A	F	D	T	E	V	Y	H	R	F	E	I	E	R	I	A	R	I	A	F	E	S	A	R	K	R	.	R	H	K	V	T	S	I	D	K	A	N	V	L	Q	.	S	S	I	L	W	R	E	I	V	N	E	I	A	T	E	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.																.	.
Template Conservation
Template Sequence		K	L	I	S	F	L	Q	N	E	L	N	V	N	K	I	R	F	P	E	T	S	G	I	G	I	K	P	V	S	E	E	G	T	S	R	L	V	R	A	A	I	D	Y	A	I	E	H	G	R	K	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	N	W	G	Y	E	L	A	E	K	E	Y
Template Known Secondary structure											S						S		G	G	G																												T		S								T	T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
																																	216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	D	V	E	L	A	H	M	Y	I	D	N	A	T	M	Q	L	I	K	D	P	S	Q	F	D	V	L	L	C	S	N	L	F	G	D	I	L	S	D	E	C	A	M	I	T	G	S	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	K	V	F	T	W	A	Q	Y	D	R	I	A	E	E	Q	G	K	D	A	A	N	K	A	Q	S	E	A	E	A	A	G	K	I	I	I	K	D	S	I	A	D	I	F	L	Q	Q	I	L	T	R	P	N	E	F	D	V	V	A	T	M	N	L	N	G	D	Y	I	S	D	A	L	A	A	Q	V	G	G	I
Template Known Secondary structure		G	G	G																													T	T																				G	G	G		S																				T	T		T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure													.																																																																				.
Query SS confidence													.																																																																				.
Query Sequence		G	M	L	P	S	A	S	L	N	E	Q	.	G	F	G	L	Y	E	P	A	G	G	S	A	P	D	I	A	G	K	N	I	A	N	P	I	A	Q	I	L	S	L	A	L	L	L	R	Y	S	L	D	A	D	D	A	A	C	A	I	E	R	A	I	N	R	A	L	E	E	G	I	R	T	G	D	L	A	R	G	.
Query Conservation													.																																																																				.
Alig confidence													.																																					.																															.
Template Conservation																																																		.
Template Sequence		G	I	A	P	G	A	N	I	N	Y	E	T	G	H	A	I	F	E	A	T	H	G	T	A	P	K	Y	A	G	L	D	K	V	N	P	S	S	V	I	L	S	G	V	L	L	L	E	H	.	L	G	W	N	E	A	A	D	L	V	I	K	S	M	E	K	T	I	A	S	K	V	V	T	Y	D	F	A	R	L	M
Template Known Secondary structure		T	T								T	T	T								S					G	G	G	T	T	T	T		S																.		T																		T	T								T	T	S
Template Predicted Secondary structure																																																		.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
				343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	A	A	V	S	T	D	E	M	G	D	I	I	A	R	Y	V	A
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		D	G	A	T	E	V	K	C	S	E	F	G	E	E	L	I	K	N	M	D
Template Known Secondary structure		S	S																T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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