Job Description P30125 Confidence 100.00% Date Thu Jan 5 11:45:46 GMT 2012 Rank 8 Aligned Residues 348 % Identity 58% Template c3u1hA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-isopropylmalate dehydrogenase; PDBTitle: crystal structure of ipmdh from the last common ancestor of bacillus Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	A	V	L	P	G	D	G	I	G	P	E	V	M	T	Q	A	L	K	V	L	D	A	V	R	N	R	F	A	M	R	I	T	T	S	H	Y	D	V	G	G	A	A	I	D	N	H	G	Q	P	L	P	P	A	T	V	E	G	C	E	Q	A	D	A	V	L	F	G	S	V	G	G	P	K	W	E	H	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	A	V	L	P	G	D	G	I	G	P	E	V	M	E	A	A	I	E	V	L	K	A	V	A	E	R	F	G	H	E	F	E	F	E	Y	G	L	I	G	G	A	A	I	D	E	A	G	T	P	L	P	E	E	T	L	D	V	C	R	G	S	D	A	I	L	L	G	A	V	G	G	P	K	W	D	Q	N	P
Template Known Secondary structure									S	T	T																				S											T						S	S	S	S	S	S										T	S	S										S	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	Q	Q	P	E	R	G	A	L	L	P	L	R	K	H	F	K	L	F	S	N	L	R	P	A	K	L	Y	Q	G	L	E	A	F	C	P	L	R	A	D	I	A	A	N	G	F	D	I	L	C	V	R	E	L	T	G	G	I	Y	F	G	Q	P	K	G	R	E	G	S	G	Q	Y	E	K	A	F	D	T	E
Query Conservation
Alig confidence								.																																			.																							.	.	.	.	.	.	.	.
Template Conservation								.																																			.																							.	.	.	.	.	.	.	.
Template Sequence		S	E	L	R	P	E	.	K	G	L	L	G	I	R	K	G	L	D	L	F	A	N	L	R	P	V	K	V	Y	D	S	L	A	D	A	S	P	L	K	K	E	.	V	I	E	G	V	D	L	V	I	V	R	E	L	T	G	G	L	Y	F	E	E	G	.	.	.	.	.	.	.	.	E	E	A	A	V	D	T	L
Template Known Secondary structure			S	S	S	S	S	.										T	T												G	G	G	T	T	S	S	S	S				.			S	S										S	S	B	S				T	T	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure								.																																			.																							.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.									.	.	.	.	150	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	H	R	F	E	I	E	R	I	A	R	I	A	F	E	S	A	R	K	R	R	H	K	V	T	S	I	D	K	A	N	V	L	Q	S	S	I	L	W	R	E	I	V	N	E	I	A	T	E	Y	P	D	V	E	L	A	H	M	Y	I	D	N	A	T	M	Q	L	I	K	D	P	S	Q	F	D	V	L	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	T	R	E	E	I	E	R	I	I	R	K	A	F	E	L	A	L	T	R	K	K	K	V	T	S	V	D	K	A	N	V	L	E	S	S	R	L	W	R	E	V	A	E	E	V	A	K	E	Y	P	D	V	E	L	E	H	M	L	V	D	N	A	A	M	Q	L	I	R	N	P	R	Q	F	D	V	I	V	T
Template Known Secondary structure		B																			T	T	T	S								T	T	T																T	T		T	T	S																		G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	L	F	G	D	I	L	S	D	E	C	A	M	I	T	G	S	M	G	M	L	P	S	A	S	L	N	E	Q	G	F	G	L	Y	E	P	A	G	G	S	A	P	D	I	A	G	K	N	I	A	N	P	I	A	Q	I	L	S	L	A	L	L	L	R	Y	S	L	D	A	D	D	A	A	C	A	I	E	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	M	F	G	D	I	L	S	D	E	A	S	M	I	T	G	S	L	G	M	L	P	S	A	S	L	S	T	D	G	L	G	L	Y	E	P	V	H	G	S	A	P	D	I	A	G	K	G	I	A	N	P	L	A	T	I	L	S	A	A	M	M	L	R	Y	S	F	G	L	E	E	E	A	K	A	I	E	K	A
Template Known Secondary structure																		S		T	T	T								T	T	S							S	S				T	T	T	T	T	S	S		S		T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		I	N	R	A	L	E	E	G	I	R	T	G	D	L	A	R	G	.	A	A	A	V	S	T	D	E	M	G	D	I	I	A	R	Y	V	A	E	G	V
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		V	E	K	V	L	A	E	G	Y	R	T	A	D	I	A	K	P	G	G	K	Y	V	S	T	T	E	M	T	D	E	V	K	A	A	V	V	D	E	L
Template Known Secondary structure									T			B	T	T	T	S		S	S				B																T	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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