Job Description P30125 Confidence 100.00% Date Thu Jan 5 11:45:46 GMT 2012 Rank 4 Aligned Residues 356 % Identity 52% Template c3r8wC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:3-isopropylmalate dehydrogenase 2, chloroplastic; PDBTitle: structure of 3-isopropylmalate dehydrogenase isoform 2 from2 arabidopsis thaliana at 2.2 angstrom resolution Resolution 2.25 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	Y	H	I	A	V	L	P	G	D	G	I	G	P	E	V	M	T	Q	A	L	K	V	L	D	A	V	R	N	R	F	A	M	R	I	T	T	S	H	Y	D	V	G	G	A	A	I	D	N	H	G	Q	P	L	P	P	A	T	V	E	G	C	E	Q	A	D	A	V	L	F	G	S	V	G	G	P	K	W	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	Y	T	I	T	L	L	P	G	D	G	I	G	P	E	V	V	S	I	A	K	N	V	L	Q	Q	A	G	S	L	E	G	V	E	F	N	F	R	E	M	P	I	G	G	A	A	L	D	L	V	G	V	P	L	P	E	E	T	I	S	A	A	K	E	S	D	A	V	L	L	G	A	I	G	G	Y	K	W	D
Template Known Secondary structure												S	T	T																			T	T																			S	S	S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		H	L	P	P	D	Q	Q	P	E	R	G	A	L	L	P	L	R	K	H	F	K	L	F	S	N	L	R	P	A	K	L	Y	Q	G	L	E	A	F	C	P	L	R	A	D	I	A	A	N	G	F	D	I	L	C	V	R	E	L	T	G	G	I	Y	F	G	Q	P	K	G	R	E	G	S	G	.	Q	Y	E	K	A
Query Conservation																																																																												.
Alig confidence											.																																			.																														.
Template Conservation											.																																			.
Template Sequence		N	N	E	K	H	L	R	P	E	.	K	G	L	L	Q	I	R	A	A	L	K	V	F	A	N	L	R	P	A	T	V	L	P	Q	L	V	D	A	S	T	L	K	R	E	.	V	A	E	G	V	D	L	M	V	V	R	E	L	T	G	G	I	Y	F	G	E	P	R	G	I	K	T	N	E	N	G	E	E	V	G
Template Known Secondary structure		T	S		G	G	G	S			.											T												G	G	G	G	G	G	S	S	S				.			T	T										S		S	T	T	T		S	S							G	G	G
Template Predicted Secondary structure											.																																			.
Template SS confidence
		83	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	T	E	V	Y	H	R	F	E	I	E	R	I	A	R	I	A	F	E	S	A	R	K	R	R	H	K	V	T	S	I	D	K	A	N	V	L	Q	S	S	I	L	W	R	E	I	V	N	E	I	A	T	E	Y	P	D	V	E	L	A	H	M	Y	I	D	N	A	T	M	Q	L	I	K	D	P	S	Q	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	T	E	V	Y	A	A	H	E	I	D	R	I	A	R	V	A	F	E	T	A	R	K	R	R	G	K	L	C	S	V	D	K	A	N	V	L	E	A	S	I	L	W	R	K	R	V	T	A	L	A	S	E	Y	P	D	V	E	L	S	H	M	Y	V	D	N	A	A	M	Q	L	V	R	D	P	K	Q	F	D
Template Known Secondary structure																									T	T	T	S								T	T	T															G	G	G	S	T	T	S																		G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	C	S	N	L	F	G	D	I	L	S	D	E	C	A	M	I	T	G	S	M	G	M	L	P	S	A	S	L	N	E	Q	G	F	G	L	Y	E	P	A	G	G	S	A	P	D	I	A	G	K	N	I	A	N	P	I	A	Q	I	L	S	L	A	L	L	L	R	Y	S	L	D	A	D	D	A	A	C	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	V	T	N	N	I	F	G	D	I	L	S	D	E	A	S	M	I	T	G	S	I	G	M	L	P	S	A	S	L	S	D	S	G	P	G	L	F	E	P	I	H	G	S	A	P	D	I	A	G	Q	D	K	A	N	P	L	A	T	I	L	S	A	A	M	L	L	K	Y	G	L	G	E	E	K	A	A	K	R
Template Known Secondary structure																						S		G	G	G								S	S	S							S	S				T	T	S	T	T	T	T				T														T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		I	E	R	A	I	N	R	A	L	E	E	G	I	R	T	G	D	L	A	R	G	A	A	.	A	V	S	T	D	E	M	G	D	I	I	A	R	Y	V	A
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		I	E	D	A	V	L	V	A	L	N	N	G	F	R	T	G	D	I	Y	S	A	G	T	K	L	V	G	C	K	E	M	G	E	E	V	L	K	S	V	D
Template Known Secondary structure												T	T				G	G	G			T	T	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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