 |
Job Description | P30125 | Confidence | 17.86% | Date | Thu Jan 5 11:45:46 GMT 2012 |
Rank | 62 | Aligned Residues | 67 |
% Identity | 18% | Template | c3lwzC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:3-dehydroquinate dehydratase; |
PDBTitle: 1.65 angstrom resolution crystal structure of type ii 3-2 dehydroquinate dehydratase (aroq) from yersinia pestis
|
Resolution | 1.65 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | K | N | Y | H | I | A | V | L | P | G | D | G | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | E | V | M | T | Q | A | L | K | V | L | D | A | V | R | N | R | F | A | M | R | I | T | T | S | H | Y | D | V | G | G | A | A | I | D | N | H | G | Q | P | L | P | P | A | T | V | E | G | C | E | Q | A | D |
Query Conservation |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|
| . | . | . | . | . | . | . | . |
|   |
|   |   |
|   |   |   |   |
|
Template Sequence |   |
M | S | D | K | F | H | I | L | L | L | N | G | P | N | L | N | L | L | G | T | R | E | P | E | K | Y | G | Y | T | T | L | A | E | I | V | S | Q | L | E | I | Q | A | Q | G | M | D | V | A | L | S | H | L | Q | S | N | A | E | H | A | L | I | . |
. |
. |
. |
. |
. |
. |
. |
D | S | I | H | Q | A | R | G | N | T | D |
Template Known Secondary structure |   |
|
| S | S |
|  |  |  |  |  |  |
| T | T | G | G | G | T | T |
| S | S |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S |
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T | T | T |
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | . |
  |
  |   |
70 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
A | V | L | F | G | S |
Query Conservation |   |
  |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
Template Sequence |   |
F | I | L | I | N | P |
Template Known Secondary structure |   |
 |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|