 |
Job Description | P30125 | Confidence | 19.26% | Date | Thu Jan 5 11:45:46 GMT 2012 |
Rank | 59 | Aligned Residues | 80 |
% Identity | 15% | Template | c3l0gD_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; |
PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 ehrlichia chaffeensis at 2.05a resolution
|
Resolution | 2.05 Å |
|
 |
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | A | N | V | L | Q | S | S | I | L | W | R | E | I | V | N | E | I | A | T | E | Y | P | D | V | E | L | A | H | M | Y | I | D | N | A | T | M | Q | L | I | K | D | P | S | Q | F | D | V | L | L | C | S | N | L | F | G | D | I | L | S | D | E | C | A | M | I | T | G | S | M | G | M | L | P | S | A | S | L | N | E |
Query Conservation |   |
|
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   | . |
|
|
|   |
|   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|   |   |
Template Sequence |   |
K | D | N | H | I | A | S | C | G | S | I | T | L | A | I | Q | R | L | R | K | N | L | K | N | E | Y | I | A | . |
I | E | C | D | N | I | S | Q | V | E | E | S | L | S | N | N | V | D | M | I | L | L | D | N | M | S | I | S | E | I | K | K | A | V | D | I | V | N | G | K | S | V | L | E | V | S | G | C | V | N | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|  |  | . |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  | S |
|
|
| T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |
  |   |
275 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
Q |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
R |
Template Known Secondary structure |   |
T |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
242 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|