Job Description P30125 Confidence 100.00% Date Thu Jan 5 11:45:46 GMT 2012 Rank 9 Aligned Residues 348 % Identity 36% Template c3fmxX_ PDB info PDB header:oxidoreductase Chain: X: PDB Molecule:tartrate dehydrogenase/decarboxylase; PDBTitle: crystal structure of tartrate dehydrogenase from pseudomonas2 putida complexed with nadh Resolution 2.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	Y	H	I	A	V	L	P	G	D	G	I	G	P	E	V	M	T	Q	A	L	K	V	L	D	A	V	R	N	R	F	A	M	R	I	T	T	S	H	Y	D	V	.	G	G	A	A	I	D	N	H	G	Q	P	L	P	P	A	T	V	E	G	C	E	Q	A	D	A	V	L	F	G	S	V	G	G	P	K	W	E
Query Conservation																																												.
Alig confidence																																												.																																					.
Template Conservation																																																																																	.
Template Sequence		S	F	R	I	A	A	I	P	G	D	G	I	G	L	E	V	L	P	E	G	I	R	V	L	E	A	A	A	L	K	H	G	L	A	L	E	F	D	T	F	E	W	A	S	C	D	Y	Y	L	Q	H	G	K	M	M	P	D	D	W	A	E	Q	L	K	Q	Y	D	A	I	Y	F	G	A	V	G	W	P	D	K	.
Template Known Secondary structure											S	T						S															T							B		S		S	S								S	S	S	S		T	T						T	T	S	S									B	T	T	T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	P	P	D	Q	Q	P	E	R	G	A	L	L	P	L	R	K	H	F	K	L	F	S	N	L	R	P	A	K	L	Y	Q	G	L	E	A	F	C	P	L	R	A	D	I	A	A	N	G	F	D	I	L	C	V	R	E	L	T	G	G	I	Y	F	G	Q	P	K	G	R	E	G	S	G	Q	Y	E	K	A	F
Query Conservation
Alig confidence		.	.																																									.	.	.
Template Conservation		.	.																																									.	.	.
Template Sequence		.	.	V	P	D	H	I	S	L	W	G	S	L	L	K	F	R	R	E	F	D	Q	Y	V	N	I	R	P	V	R	L	F	P	G	V	P	C	A	L	A	N	R	.	.	.	K	V	G	D	I	D	F	V	V	V	R	E	N	T	E	G	E	Y	S	S	L	G	G	I	M	F	E	N	T	E	N	E	I	V	I
Template Known Secondary structure		.	.	B								T	T								T	T												T	T				S	S	S	S		.	.	.		T	T											S	S	B	T									S	T	T	S	T	T
Template Predicted Secondary structure		.	.																																									.	.	.
Template SS confidence
				84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																										.															.
Query SS confidence																										.															.
Query Sequence		D	T	E	V	Y	H	R	F	E	I	E	R	I	A	R	I	A	F	E	S	A	R	K	R	.	R	H	K	V	T	S	I	D	K	A	N	V	L	Q	.	S	S	I	L	W	R	E	I	V	N	E	I	A	T	E	Y	P	D	V	E	L	A	H	M	Y	I	D	N	A	T	M	Q	L	I	K	D	P	S	Q	F
Query Conservation																										.															.
Alig confidence																										.															.
Template Conservation
Template Sequence		Q	E	S	I	F	T	R	R	G	V	D	R	I	L	K	Y	A	F	D	L	A	E	K	R	E	R	K	H	V	T	S	A	T	K	S	N	G	M	A	I	S	M	P	Y	W	D	K	R	T	E	A	M	A	A	H	Y	P	H	V	S	W	D	K	Q	H	I	D	I	L	C	A	R	F	V	L	Q	P	E	R	F
Template Known Secondary structure					B												T	T	S	S	T	T	T	T	S	S	S									T	T	T	S	S	S														T	T		T	T	S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																						.	.																																							.	.	.	.
Query SS confidence																																						.	.																																							.	.	.	.
Query Sequence		D	V	L	L	C	S	N	L	F	G	D	I	L	S	D	E	C	A	M	I	T	G	S	M	G	M	L	P	S	A	S	L	N	E	Q	G	.	.	F	G	L	Y	E	P	A	G	G	S	A	P	D	I	A	G	K	N	I	A	N	P	I	A	Q	I	L	S	L	A	L	L	L	R	Y	S	L	D	.	.	.	.
Query Conservation																																						.	.																																							.	.	.	.
Alig confidence																																						.	.																																				.			.	.	.	.
Template Conservation																																																																											.
Template Sequence		D	V	V	V	A	S	N	L	F	G	D	I	L	S	D	L	G	P	A	C	A	G	T	I	G	I	A	P	S	A	N	L	N	P	E	R	N	F	P	S	L	F	E	P	V	H	G	S	A	P	D	I	F	G	K	N	I	A	N	P	I	A	M	I	W	S	G	A	L	M	L	E	F	.	L	G	Q	G	D	E
Template Known Secondary structure		S						T					T	T	T	T	T	T	T	T	T	T	T		G	G	G								T	T		S	S							S	S				G	G	G	T	T	S																			.				S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.
			315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	D	D	A	A	C	A	I	E	R	A	I	N	R	A	L	E	E	G	I	R	T	G	D	L	A	R	G	A	A	A	V	S	T	D	E	M	G	D	I	I	A	R	Y	V	A	E
Query Conservation		.
Alig confidence		.																														.	.	.
Template Conservation																																.	.	.
Template Sequence		R	Y	Q	R	A	H	D	D	M	L	N	A	I	E	R	V	I	A	D	G	S	V	T	P	D	M	G	G	T	L	.	.	.	S	T	Q	Q	V	G	A	A	I	S	D	T	L	A	R
Template Known Secondary structure																					T				T	T	T	T				.	.	.
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions