Job Description P30125 Confidence 100.00% Date Thu Jan 5 11:45:46 GMT 2012 Rank 20 Aligned Residues 325 % Identity 34% Template c3blxL_ PDB info PDB header:oxidoreductase Chain: L: PDB Molecule:isocitrate dehydrogenase [nad] subunit 2; PDBTitle: yeast isocitrate dehydrogenase (apo form) Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	N	Y	H	I	A	V	L	P	G	D	G	I	G	P	E	V	M	T	Q	A	L	K	V	L	D	A	V	R	N	R	F	A	M	R	I	T	T	S	H	Y	D	V	G	G	A	A	I	D	N	H	G	Q	P	L	P	P	A	T	V	E	G	C	E	Q	A	D	A	V	L	F	G	S	V	G	G	P	K	W
Query Conservation
Alig confidence																															.	.	.	.													.																																		.
Template Conservation																															.	.	.	.													.																																		.
Template Sequence		T	G	K	Y	T	V	S	F	I	E	G	D	G	I	G	P	E	I	S	K	S	V	K	K	I	F	S	A	A	.	.	.	.	N	V	P	I	E	W	E	S	C	D	V	S	.	P	I	F	V	N	G	L	T	T	I	P	D	P	A	V	Q	S	I	T	K	N	L	V	A	L	K	G	P	L	A	T	P	H	.
Template Known Secondary structure		T	S					B					S	T	T														T	T	.	.	.	.	T		S										.					T	T																S												.
Template Predicted Secondary structure																															.	.	.	.													.																																		.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	L	P	P	D	Q	Q	P	E	R	G	A	L	L	P	L	R	K	H	F	K	L	F	S	N	L	R	P	A	K	L	Y	Q	G	L	E	A	F	C	P	L	R	A	D	I	A	A	N	G	F	D	I	L	C	V	R	E	L	T	G	G	I	Y	F	G	Q	P	K	G	R	E	G	S	G	Q	Y	E	K	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	R	S	L	N	L	T	L	R	K	T	F	G	L	F	A	N	V	R	P	A	K	S	I	E	G	F	K	T	.	.	.	.	.	.	.	.	T	Y	E	N	V	D	L	V	L	I	R	E	N	T	E	G	E	Y	S	G	I	E	H	I	V	.	.	.	.	C	P	G	V	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.											T	T												T	T				.	.	.	.	.	.	.	.	S	S		S										S	S										S	.	.	.	.	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
												97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.															.
Query SS confidence																											.															.
Query Sequence		F	D	T	E	V	Y	H	R	F	E	I	E	R	I	A	R	I	A	F	E	S	A	R	K	R	.	R	H	K	V	T	S	I	D	K	A	N	V	L	Q	.	S	S	I	L	W	R	E	I	V	N	E	I	A	T	E	Y	P	D	V	E	L	A	H	M	Y	I	D	N	A	T	M	Q	L	I	K	D	P	S	Q
Query Conservation																											.															.
Alig confidence																											.															.
Template Conservation
Template Sequence		Q	S	I	K	L	I	T	R	D	A	S	E	R	V	I	R	Y	A	F	E	Y	A	R	A	I	G	R	P	R	V	I	V	V	H	K	S	T	I	Q	R	L	A	D	G	L	F	V	N	V	A	K	E	L	S	K	E	Y	P	D	L	T	L	E	T	E	L	I	D	N	S	V	L	K	V	V	T	N	P	S	A
Template Known Secondary structure																										T	T		S							S		T	T	T																T	T		T	T	S																		G	G	G
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure				.	.																				.
Query SS confidence				.	.																				.
Query Sequence		F	D	.	.	V	L	L	C	S	N	L	F	G	D	I	L	S	D	E	C	A	M	I	.	T	G	S	M	G	M	L	P	S	A	S	L	N	E	Q	G	F	G	L	Y	E	P	A	G	G	S	A	P	D	I	A	G	K	N	I	A	N	P	I	A	Q	I	L	S	L	A	L	L	L	R	Y	S	L	D	A	D
Query Conservation				.	.																				.
Alig confidence				.	.																				.																.																																				.
Template Conservation																																									.																																				.
Template Sequence		Y	T	D	A	V	S	V	C	P	N	L	Y	G	D	I	L	S	D	L	N	S	G	L	S	A	G	S	L	G	L	T	P	S	A	N	I	G	H	K	.	I	S	I	F	E	A	V	H	G	S	A	P	D	I	A	G	Q	D	K	A	N	P	T	A	L	L	L	S	S	V	M	M	L	N	H	.	M	G	L	T
Template Known Secondary structure		G	T	T																						T	S	S	S	T	T								S	S	.								S				G	G	G	T	T	T	T				T														.		T
Template Predicted Secondary structure																																									.																																				.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		D	A	A	C	A	I	E	R	A	I	N	R	A	L	E	E	G	.	.	I	R	T	G	D	L	A	R	G	A	A	A	V	S	T	D	E	M	G	D	I	I	A	R	Y	V
Query Conservation																			.	.
Alig confidence																			.	.											.	.	.
Template Conservation																															.	.	.
Template Sequence		N	H	A	D	Q	I	Q	N	A	V	L	S	T	I	A	S	G	P	E	N	R	T	G	D	L	A	G	T	A	.	.	.	T	T	S	S	F	T	E	A	V	I	K	R	L
Template Known Secondary structure										T						T	S	S	T	T	S	S		G	G	G	T				.	.	.
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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