Job Description P30125 Confidence 15.77% Date Thu Jan 5 11:45:46 GMT 2012 Rank 69 Aligned Residues 69 % Identity 19% Template c2zkiH_ PDB info PDB header:transcription Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872) Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		K	N	Y	H	I	A	V	L	P	G	D	G	I	G	P	E	V	M	T	Q	A	L	K	V	L	D	A	V	R	N	R	F	A	M	R	I	T	T	S	H	Y	D	.	.	.	.	.	.	V	G	G	A	A	I	D	N	H	G	Q	P	L	P	P	A	T	V	E	G	C	E	Q	A	D	A	V	L	F	G	S
Query Conservation																																												.	.	.	.	.	.
Alig confidence				.									.				.	.																										.	.	.	.	.	.
Template Conservation				.									.				.	.
Template Sequence		K	P	.	N	I	L	V	L	F	Y	G	.	Y	G	S	.	.	I	V	E	L	A	K	E	I	G	K	G	A	E	E	A	G	A	E	V	K	I	R	R	V	R	E	T	L	P	P	E	F	Q	S	R	I	P	F	D	K	V	K	D	I	P	E	V	T	L	D	D	M	R	W	A	D	G	F	A	I	G	S
Template Known Secondary structure				.									.	S	S		.	.																T												S		G	G	G		T	T			G	G	G	S	T	T	S		B										S
Template Predicted Secondary structure				.									.				.	.
Template SS confidence
		4	.		.	.	.	.	10	.	.	.		.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions