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Job DescriptionP30125
Confidence100.00%DateThu Jan 5 11:45:46 GMT 2012
Rank15Aligned Residues338
% Identity33%Templatec2e0cA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:409aa long hypothetical nadp-dependent isocitrate PDBTitle: crystal structure of isocitrate dehydrogenase from sulfolobus tokodaii2 strain7 at 2.0 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SKNYHIAVLPGDGIGPEVMTQALKVLDAVRNR. . . FAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGG
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Template Sequence  PNKPVILYIEGDGIGPEITNAAIKVINKAVERAYGSSREIKWLEVYAGEKAEKLVNDRFPKETQEMLLKYRVVLKGPLE.
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Query Sequence  PKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREG. . . .
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Template Sequence  . . . . . . . . . . . . . . SVNVAIRLMLDLYANIRPVKYIEGLESPLK. . . . . HPEKVDMIIFRENTDDLYRGIEYPFNSEEAK
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SSGGGG


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Query Sequence  . . . . . . . . . . . . SGQYEKAFDTEVYHRFEIERIARIAFESARKR. RHKVTSIDKANVLQ. SSILWREIVNEIATE. . . . .
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Template Sequence  KIRDFLRKELKVEIEDDTGIGIKVMSKYKTQRITRLAIQYAIEHKRKKVTIMHKGNVMKYTEGAFREWAYEVALKEYRDF
Template Known Secondary structure  S




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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   216...220.........230.........240.........250.........260.........270.........280..
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Query Sequence  . . . . . . . . . . . . . YPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEP
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Template Sequence  IVTEEEINQGKPDQGKIILNDRIADNMFQQIIIRPEEYDIILAPNVNGDYISDAAGALIGNIGMLGGANIGDE. GGMFEA
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Query Sequence  AGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGIRTGDLAR. . GAAAVSTDEMGDIIARYVA
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Template Sequence  IHGTAPKYAGKNVANPTGIIKAGELMLRW. MGWNEAADLIEKAINMAIRDKKVTQDIARFMGVKALGTKEYADELIKIMD
Template Known Secondary structure  SS


GGGTTTT
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   329330.........340.........350....... ..360.........370.........380.........390.........400.......
 
   361
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Query Sequence  E
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Template Conservation   
Template Sequence  T
Template Known Secondary structure  T
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   408
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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