Job Description P30125 Confidence 89.50% Date Thu Jan 5 11:45:46 GMT 2012 Rank 33 Aligned Residues 170 % Identity 21% Template c2b0tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadp isocitrate dehydrogenase; PDBTitle: structure of monomeric nadp isocitrate dehydrogenase Resolution 1.75 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																										.																																									.	.	.
Query SS confidence																										.																																									.	.	.
Query Sequence		F	D	T	E	V	Y	H	R	F	E	I	E	R	I	A	R	I	A	F	E	S	A	R	K	.	R	R	H	K	V	T	S	I	D	K	A	N	V	L	Q	S	S	I	L	W	R	E	I	V	N	E	I	A	T	E	Y	P	D	V	E	L	A	H	M	Y	.	.	.	I	D	N	A	T	M	Q	L	I	K	D	P
Query Conservation																										.																																									.	.	.
Alig confidence																										.															.	.																									.	.	.
Template Conservation																																									.	.
Template Sequence		W	R	A	C	Q	V	K	D	A	P	I	Q	D	W	V	K	L	A	V	T	R	S	R	L	S	G	M	P	A	V	F	W	L	D	P	E	R	A	H	.	.	D	R	N	L	A	S	L	V	E	K	Y	L	A	D	H	D	T	E	G	L	D	I	Q	I	L	S	P	V	E	A	T	Q	L	S	I	D	R	I	R
Template Known Secondary structure																																				T	T				.	.													T	T	S			T	T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490			.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		238	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure						.																		.	.																									.										.	.	.	.	.	.
Query SS confidence						.																		.	.																									.										.	.	.	.	.	.
Query Sequence		S	Q	F	D	.	V	L	L	C	S	N	L	F	G	D	I	L	S	D	E	C	A	.	.	M	I	T	G	S	M	G	M	L	P	S	A	S	L	N	E	Q	G	F	G	L	Y	E	P	.	A	G	G	S	A	P	D	I	A	.	.	.	.	.	.	G	K	N	I	A	N	P	I	A	Q	I	L	S	L	A	L
Query Conservation						.																		.	.																									.										.	.	.	.	.	.
Alig confidence						.																		.	.																			.						.										.	.	.	.	.	.
Template Conservation																																												.
Template Sequence		R	G	E	D	T	I	S	V	T	G	N	V	L	R	D	Y	N	T	D	L	F	P	I	L	E	L	G	T	S	A	K	M	L	S	V	V	P	L	M	A	G	G	.	G	L	F	E	T	G	A	G	G	S	A	P	K	H	V	Q	Q	V	Q	E	E	N	H	L	R	W	D	S	L	G	E	F	L	A	L	A	E
Template Known Secondary structure		T	T																									S		S	S	S							B	T	T	S		.							S	S														S
Template Predicted Secondary structure																																												.
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.		.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.							.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.
Query Sequence		L	L	R	Y	S	L	D	A	D	D	.	.	.	.	.	.	A	A	C	A	I	E	R	A	I	N	R	A	L	E	E	G	I
Query Conservation												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	R	H	E	L	N	N	N	G	N	T	K	A	G	V	L	A	D	A	L	D	K	A	T	E	K	L	L	N	E	E	K
Template Known Secondary structure																																T	T
Template Predicted Secondary structure
Template SS confidence
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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