Return to main results Retrieve Phyre Job Id

Job DescriptionP76080
Confidence73.04%DateThu Jan 5 12:18:21 GMT 2012
Rank11Aligned Residues28
% Identity32%Templatec1neeA_
PDB info PDB header:translationChain: A: PDB Molecule:probable translation initiation factor 2 beta PDBTitle: structure of archaeal translation factor aif2beta from2 methanobacterium thermoautrophicum
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150......
Predicted Secondary structure 















Query SS confidence 































Query Sequence  VRCPRCASVHTTLISEFGSTACKALYRCDSCR
Query Conservation 
 

 
 
  
   
 

 
 



  
  
 
Alig confidence 






















....




Template Conservation 


  
 



 
 
  

  
 ....
 


Template Sequence  VICHECNRPDTRIIREGRISLLK. . . . CEACG
Template Known Secondary structure  T

SS
SS

TTTT....
STTS
Template Predicted Secondary structure 











....



Template SS confidence 































   100.........110.........120.. .....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions