Job Description P02413 Confidence 20.94% Date Thu Jan 5 10:57:33 GMT 2012 Rank 16 Aligned Residues 125 % Identity 20% Template d1vqoc1 SCOP info Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4 Resolution 2.20

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																													.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	K	K	A	G	K	R	L	G	R	G	I	G	S	G	L	G	K	T	G	G	R	G	H	K	G	.	Q	K	S	R	S	G	G	G	V	R	R	G	F	E	G	G	Q	M	P	L	Y	R	R	L	P	K	F	G	F	T	S	R	K	A	A	I	T	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.							.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.
Template Sequence		D	Y	G	S	D	E	Y	A	G	L	R	T	P	A	E	S	F	G	S	.	.	G	R	G	Q	A	H	V	P	K	L	D	G	R	A	R	R	V	P	Q	A	V	K	G	R	S	A	H	P	P	K	T	E	K	D	R	S	L	D	L	N	D	K	E	R	Q	L	A	V	R	S	A	L	A	A	T	A	D	A	D
Template Known Secondary structure							T	T	T	T	T					B				S	.	.	S	S	S								T	T				S	S	T	T	S	T	T				S	S				T	T																							T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
																	77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																																										100
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	L	S	D	L	A	K	V	E	G	G	V	V	D	L	N	T	L	K	A	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	A	D	R	G	H	E	F	D	R	D	E	V	P	V	V	V	S	D	D	F	E	D	L	V	K	T	Q	E	V	V	S	L	L	E	A	L	D	V	H	A	D	I	D	R	A	D	E	T	K	I	K	A	G	Q	G	S	A	R	G	R	K	Y	R	R	P	A	S	I	L	F	V	T	S	D	E	P	S	T
Template Known Secondary structure							T						S	S		S					G	G	G	G	G													T	T	T		T						T	S						S	S	G	G	G	G	G	T														S	S	S			T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		I	G	I	Q	I	E	F	A	K	V	I	L	A	G	E	V	T	T	P	V	T	V	R	G	L	.	.	.	.	.	.	R	V	T	K	G	A	R	A	A	I	E	A
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	R	N	L	A	G	A	D	V	A	T	A	S	E	V	N	T	E	D	L	A	P	G	G	A	P	G	R	L	T	V	F	T	E	S	A	L	A	E	V	A	E
Template Known Secondary structure		T	T	T	T	S	T	T						T	T	T							S	G	G	G																	T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions