Job Description P02413 Confidence 8.52% Date Thu Jan 5 10:57:33 GMT 2012 Rank 28 Aligned Residues 56 % Identity 14% Template c3jywD_ PDB info PDB header:ribosome Chain: D: PDB Molecule:60s ribosomal protein l4(b); PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution Resolution 8.90 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.
Predicted Secondary structure																						.	.	.																														.	.	.
Query SS confidence																						.	.	.																														.	.	.
Query Sequence		P	A	E	G	S	K	K	A	G	K	R	L	G	R	G	I	G	S	G	L	.	.	.	G	K	T	G	G	R	G	H	K	G	Q	K	S	R	S	G	G	G	V	R	R	G	F	E	G	G	Q	M	P	.	.	.	L	Y	R	R	L	P	K
Query Conservation																						.	.	.																														.	.	.
Alig confidence																						.	.	.																														.	.	.
Template Conservation
Template Sequence		E	K	A	G	H	Q	T	S	A	E	S	W	G	T	G	R	A	V	A	R	I	P	R	V	G	G	G	G	T	G	R	S	G	Q	G	A	F	G	N	M	C	R	G	G	R	M	F	A	P	T	K	T	W	R	K	W	N	V	K	V	N	H
Template Known Secondary structure		S	S	T	T		S	S							T	T	S	S	S		S	S	S	S	S	S	S	S		S	S				S	S	S			S	S	S	T	T	S			S	S				S	S	S								S
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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