Job Description P02413 Confidence 98.59% Date Thu Jan 5 10:57:33 GMT 2012 Rank 12 Aligned Residues 71 % Identity 28% Template c2zkro_ PDB info PDB header:ribosomal protein/rna Chain: O: PDB Molecule:rna expansion segment es30; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.																																		.	.
Query SS confidence																																.	.	.	.	.	.																																		.	.
Query Sequence		P	L	Y	R	R	L	P	K	F	G	F	T	S	R	K	A	A	I	T	A	E	I	R	L	S	D	L	A	K	V	.	.	.	.	.	.	E	G	G	V	V	D	L	N	T	L	K	A	A	N	I	I	G	I	Q	I	E	F	A	K	V	I	L	A	G	E	V	T	T	.	.	P	V	T	V	R	G	L	R	V
Query Conservation																																.	.	.	.	.	.																																		.	.
Alig confidence															.	.																.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	N	Q	V	V	L	K	R	L	F	M	S	.	.	R	T	N	R	P	P	L	S	L	S	R	M	I	R	K	M	K	L	P	G	R	E	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	V	V	V	G	T	V	T	D	D	V	R	I	L	E	V	P	K	L	K	V	C	A	L	R	V
Template Known Secondary structure													S		.	.	T	T	T	S										S		S	S	S			S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S						S	S
Template Predicted Secondary structure															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.															.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	G	A	R	A	A	I	E	A	A	G	G	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	R	A	R	S	R	I	L	K	A	G	G	K	I
Template Known Secondary structure													S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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