Job Description P02413 Confidence 4.43% Date Thu Jan 5 10:57:33 GMT 2012 Rank 39 Aligned Residues 63 % Identity 16% Template c2zkrc_ PDB info PDB header:ribosomal protein/rna Chain: C: PDB Molecule:rna expansion segment es5; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		1	.	.	.	.	.	.							.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.
Predicted Secondary structure									.	.	.	.	.	.																					.	.	.																														.	.	.
Query SS confidence									.	.	.	.	.	.																					.	.	.																														.	.	.
Query Sequence		M	R	L	N	T	L	S	.	.	.	.	.	.	P	A	E	G	S	K	K	A	G	K	R	L	G	R	G	I	G	S	G	L	.	.	.	G	K	T	G	G	R	G	H	K	G	Q	K	S	R	S	G	G	G	V	R	R	G	F	E	G	G	Q	M	P	.	.	.	L	Y	R	R	L	P	K
Query Conservation									.	.	.	.	.	.																					.	.	.																														.	.	.
Alig confidence									.	.	.	.	.	.																					.	.	.																														.	.	.
Template Conservation
Template Sequence		N	L	R	K	N	N	R	Q	P	Y	A	V	S	E	L	A	G	H	Q	T	S	A	E	S	W	G	T	G	R	A	V	A	R	I	P	R	V	R	G	G	G	T	H	R	S	G	Q	G	A	F	G	N	M	C	R	G	G	R	M	F	A	P	T	K	T	W	R	R	W	H	R	R	V	N	T
Template Known Secondary structure						T	T								S		T	T	T		S							S	S	S	S	S			S			B	T	T	T	T	B				S	T	T			T	T	S	T	T					S	S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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