Job Description P76015 Confidence 86.90% Date Thu Jan 5 12:17:27 GMT 2012 Rank 15 Aligned Residues 77 % Identity 19% Template c3gdwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma-54 interaction domain protein; PDBTitle: crystal structure of sigma-54 interaction domain protein from2 enterococcus faecalis Resolution 2.00 Å

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		83	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.																																		.
Query SS confidence										.	.																																		.
Query Sequence		P	D	K	I	F	E	C	A	.	.	M	Q	V	D	G	G	E	G	V	L	L	I	I	K	N	Y	T	G	D	I	L	N	F	E	T	A	T	E	L	L	H	D	S	.	G	V	K	V	T	T	V	V	I	D	D	D	V	A	V	K	D	S	L	Y	T	A	G	R	R	G	V	A	N	T	V	L	I	E	K	L
Query Conservation										.	.																																		.
Alig confidence										.	.														.	.	.	.	.																.								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.																								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	E	Q	L	R	N	Q	V	I	T	Q	K	E	S	L	N	N	G	I	L	L	L	T	.	.	.	.	.	D	X	G	S	L	N	S	F	G	N	X	L	F	E	E	T	G	I	R	T	K	A	I	.	.	.	T	X	T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	I	V	L	E
Template Known Secondary structure											T	S	T	G	G	G	T	T							.	.	.	.	.		S	G	G	G	G	G																	.	.	.		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.																								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610						.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.				.	.	.	.	.																	.	640	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	A	A	E	R	G	D	S	L	D	A	C	A	E	L	G	R	K	L	N	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	R	X	A	S	V	G	R	S	L	E	D	I	Y	Q	N	I	Q	L	S	F	E	S
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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