Job Description P76015 Confidence 100.00% Date Thu Jan 5 12:17:27 GMT 2012 Rank 4 Aligned Residues 317 % Identity 46% Template c3ct4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:pts-dependent dihydroxyacetone kinase, PDBTitle: structure of dha-kinase subunit dhak from l. lactis Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	L	I	N	D	V	Q	D	V	L	D	E	Q	L	A	G	L	A	K	A	H	P	S	L	T	L	H	Q	D	P	V	Y	V	T	R	A	D	A	P	V	A	G	K	V	A	L	L	S	G	G	G	S	G	H	E	P	M	H	C	G	Y	I	G	Q	G	M	L	S	G	A	C	P	G	E	I	F	T	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	I	I	N	Q	P	Q	D	V	V	S	E	M	L	D	G	L	T	Y	A	Y	G	D	L	I	E	K	V	P	D	F	E	I	I	Q	R	K	S	P	K	S	G	K	V	A	L	V	S	G	G	G	S	G	H	E	P	A	H	A	G	F	V	G	E	G	M	L	S	A	A	V	C	G	A	I	F	T	S	P
Template Known Secondary structure						S	S	G	G	G													T	T	T				S	G	G	G	S							S				S											S	S	T	T	T	T	G	G	G	B	S	B	T	S	B	S								T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	D	K	I	F	E	C	A	M	Q	V	D	G	G	E	G	V	L	L	I	I	K	N	Y	T	G	D	I	L	N	F	E	T	A	T	E	L	L	H	D	S	G	V	K	V	T	T	V	V	I	D	D	D	V	A	V	K	D	S	L	Y	T	A	G	R	R	G	V	A	N	T	V	L	I	E	K	L	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	D	Q	I	Y	E	A	I	K	S	A	D	E	G	A	G	V	L	L	I	I	K	N	Y	L	G	D	V	M	N	F	E	M	A	R	E	M	A	E	M	E	E	I	K	V	E	Q	I	I	V	D	D	D	I	A	V	E	N	S	L	Y	T	Q	G	R	R	G	V	A	G	T	V	L	V	H	K	I	L	G
Template Known Secondary structure																S	S								S																		T	T											B		S	S	S	S		T	T		S	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	E	R	G	D	S	L	D	A	C	A	E	L	G	R	K	L	N	N	Q	G	H	S	I	G	I	A	L	G	A	C	T	V	P	A	A	G	K	P	S	F	T	L	A	D	N	E	M	E	F	G	V	G	I	H	G	E	P	G	I	D	R	R	P	F	S	S	L	D	Q	T	V	D	E	M	F	D	T
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	A	H	Q	E	A	S	L	D	E	I	K	D	L	A	D	K	V	V	K	N	I	K	T	I	G	L	A	L	S	A	A	T	V	P	.	.	.	.	.	.	.	.	.	.	D	N	E	I	E	Y	G	V	G	I	H	S	E	P	G	Y	R	R	E	K	M	K	T	S	Y	E	L	A	T	E	L	V	G	K
Template Known Secondary structure						T	T															T	T								S	S						.	.	.	.	.	.	.	.	.	.							T			T	T	S				S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.											200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	N	G	S	Y	H	R	T	L	R	F	W	D	Y	Q	Q	G	S	W	Q	E	E	Q	Q	T	K	Q	P	L	Q	S	G	D	R	V	I	A	L	V	N	N	L	G	A	T	P	L	S	E	L	Y	G	V	Y	N	R	L	T	T	R	C	Q	Q	A	G	L	T	I	E	R	N	L	I	G	A	Y	C	T
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	F	E	A	G	Q	K	Y	G	I	L	V	N	G	M	G	A	T	P	L	M	E	Q	F	I	F	M	N	D	V	A	K	L	L	T	E	E	N	I	E	I	L	F	K	K	V	G	N	Y	M	T
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T			T	T											B	S	S																		T	T	T											S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.																									.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		S	L	D	M	T	G	F	S	I	T	L	L	K	V	D	D	E	.	T	L	A	L	W	D	A	P	V	H	T	P	A	L
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		S	I	D	M	A	G	L	S	L	T	M	I	K	L	E	D	D	Q	W	L	K	N	L	N	E	D	V	K	T	I	S	W
Template Known Secondary structure			T	T	B												S								T	S			B		S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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