Job Description P76015 Confidence 100.00% Date Thu Jan 5 12:17:27 GMT 2012 Rank 5 Aligned Residues 315 % Identity 34% Template c2iu6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:dihydroxyacetone kinase; PDBTitle: regulation of the dha operon of lactococcus lactis Resolution 2.0 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	I	N	D	V	Q	D	V	L	D	E	Q	L	A	G	L	A	K	A	H	P	S	L	T	L	H	Q	D	P	V	Y	V	T	R	A	D	A	P	V	A	G	K	V	A	L	L	S	G	G	G	S	G	H	E	P	M	H	C	G	Y	I	G	Q	G	M	L	S	G	A	C	P	G	E	I	F	T	S	P	T
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		E	F	Y	N	S	T	N	E	I	P	E	E	M	L	K	G	I	D	L	T	Y	P	Q	L	T	Y	L	P	E	T	G	I	L	Y	D	N	T	Y	N	.	E	K	T	V	P	I	I	S	G	G	G	S	G	H	E	P	A	H	V	G	Y	V	G	S	G	M	L	A	A	A	V	T	G	P	L	F	I	P	P	K
Template Known Secondary structure							T	T	S														T	T					T	T	T	T					T	T			.	S	S	S										S	S	T	T	T	T	G	G	G	B	S	T	T	S	B	S								T
Template Predicted Secondary structure																																									.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	K	I	F	E	C	A	M	Q	V	D	G	G	E	G	V	L	L	I	I	K	N	Y	T	G	D	I	L	N	F	E	T	A	T	E	L	L	H	D	S	G	V	K	V	T	T	V	V	I	D	D	D	V	A	V	K	D	S	L	Y	T	A	G	R	R	G	V	A	N	T	V	L	I	E	K	L	V	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	N	I	L	K	A	I	R	Q	V	N	S	G	K	G	V	F	V	I	I	K	N	F	E	A	D	L	K	E	F	N	E	A	I	K	E	A	R	T	E	G	I	D	V	R	Y	I	V	S	H	D	D	I	S	V	N	A	Y	N	F	H	K	R	H	R	G	V	A	G	T	I	L	L	H	K	I	L	G	A
Template Known Secondary structure														S	S	S								S																		T	T											B			B		T	T	T			B						T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	R	G	D	S	L	D	A	C	A	E	L	G	R	K	L	N	N	Q	G	H	S	I	G	I	A	L	G	A	C	T	V	P	A	A	G	K	P	S	F	T	L	A	D	N	E	M	E	F	G	V	G	I	H	G	E	P	G	I	D	R	R	P	F	S	S	L	D	Q	T	V	D	E	M	F	D	T	L
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	K	E	G	G	S	I	D	E	I	E	Q	L	A	L	S	L	S	P	E	I	Y	T	L	G	V	A	L	A	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	V	S	F	G	I	G	I	H	G	E	P	G	Y	R	V	E	K	F	E	G	S	E	R	I	A	I	E	L	V	N	K	L
Template Known Secondary structure					T	T														G	G	G												.	.	.	.	.	.	.	.	.	.	.	.	.	.						T			T	T	S				S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.															.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	G	S	Y	H	R	T	L	R	F	W	D	Y	Q	Q	G	S	W	Q	E	E	Q	Q	T	K	Q	P	L	Q	S	G	D	R	V	I	A	L	V	N	N	L	G	A	T	P	L	S	E	L	Y	G	V	Y	N	R	L	T	T	R	C	Q	Q	A	G	L	T	I	E	R	N	L	I	G	A	Y	C	T	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	E	I	N	W	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	N	K	N	Y	I	L	L	V	N	G	L	G	S	T	T	L	M	E	L	Y	S	F	Q	Y	D	V	M	R	L	L	E	L	E	G	L	S	V	K	F	C	K	V	G	N	L	M	T	S
Template Known Secondary structure							G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S												B	S																				T	T											S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.																							.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		L	D	M	T	G	F	S	I	T	L	L	K	V	D	D	.	E	T	L	A	L	W	D	A	P	V	H	T	P	A	L	N	W
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		C	D	M	S	G	I	S	L	T	L	C	S	V	K	D	P	K	W	L	D	Y	L	N	V	P	T	G	A	F	A	W	L	E
Template Known Secondary structure		T	T	B												S	T								S					T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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