Job Description P76015 Confidence 93.18% Date Thu Jan 5 12:17:27 GMT 2012 Rank 9 Aligned Residues 197 % Identity 16% Template c1mgpA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:hypothetical protein tm841; PDBTitle: hypothetical protein tm841 from thermotoga maritima reveals2 fatty acid binding function Resolution 2.00 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		T	S	P	T	P	D	K	I	F	E	C	A	M	Q	V	D	G	G	E	G	.	.	.	.	V	L	L	I	I	K	N	Y	T	G	D	I	L	N	F	E	T	A	T	E	L	L	H	D	S	G	V	K	V	T	T	V	V	I	D	D	D	V	A	V	K	D	S	L	Y	T	A	G	R	R	G	V	A	N	T	V
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.																							.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	P	S	V	E	D	F	K	K	R	Y	L	K	Y	K	E	E	D	Y	D	V	V	L	V	L	T	L	S	S	K	L	S	G	T	Y	N	S	A	V	L	A	S	K	E	V	.	.	.	.	.	D	I	P	V	Y	V	V	D	T	L	L	A	S	.	.	.	.	.	.	.	.	.	.	.	.	G	A	I	P
Template Known Secondary structure																			T	T		S							S		T	T	T		S												S	.	.	.	.	.	S	S								S			G	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T
Template Predicted Secondary structure																																																.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.													.	.	150	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																												.	.																						.	.	.	.	.	.
Query SS confidence																												.	.																						.	.	.	.	.	.
Query Sequence		L	I	E	K	L	V	G	A	A	A	E	R	G	D	S	L	D	A	C	A	E	L	G	R	K	L	.	.	N	N	Q	G	H	S	I	G	I	A	L	G	A	C	T	V	P	A	A	G	K	.	.	.	.	.	.	P	S	F	T	L	A	D	N	E	M	E	F	G	V	G	I	H	G	E	P	G	I	D	R	R
Query Conservation																												.	.																						.	.	.	.	.	.
Alig confidence																												.	.																						.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	A	R	V	A	R	E	X	L	E	N	G	A	T	I	E	E	V	L	K	K	L	D	E	R	X	K	N	K	D	F	K	A	I	F	Y	V	S	N	F	D	Y	L	V	K	G	G	R	V	L	L	K	I	R	V	C	L	H	I	E	N	G	E	L	I	P	.	.	.	.	.	.	.	.	.	.	.	Y	R
Template Known Secondary structure													T	T																T	T									S		T							T				T	T									T	T					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.												.	220
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	S	S	L	D	Q	T	V	D	E	M	F	D	T	L	L	V	N	G	S	Y	H	R	T	L	R	F	W	D	Y	Q	Q	G	S	W	Q	E	E	Q	Q	T	K	Q	P	L	Q	S	G	D	R	V	I	A	L	V	N	N	L	G	A	T	P	L	S	E	L	Y	G	V	Y	N	R	L	T	T	R	C	Q	Q
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		K	V	R	G	D	K	K	A	I	E	A	L	I	E	K	L	R	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	E	G	S	K	L	R	V	I	G	V	H	A	D	.	.	N	E	A	G	V	V	E	L	L	N	T	L	R	K	S	Y	E	V
Template Known Secondary structure					S														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T										S	S	.	.													T	T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																											.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		307	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		A	G	L	T	I	E	R	N	L	I	G	A	.	.	.	Y	C	T	S	L	D	M	T	G	F	S	I	T	L	L
Query Conservation														.	.	.
Alig confidence									.	.				.	.	.
Template Conservation									.	.
Template Sequence		V	D	E	I	I	S	P	.	.	X	G	K	V	I	T	T	H	V	G	P	G	T	V	G	F	G	I	E	V	L
Template Known Secondary structure									.	.											T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		282	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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