Job Description P75767 Confidence 100.00% Date Thu Jan 5 12:13:55 GMT 2012 Rank 4 Aligned Residues 274 % Identity 16% Template d2ffea1 SCOP info CofD-like CofD-like CofD-like Resolution 2.90

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.														.	.	.	.	.	.
Predicted Secondary structure																				.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	L	G	G	G	H	G	L	G	R	V	L	S	S	L	S	S	.	.	L	G	S	R	L	T	G	I	V	T	T	T	D	N	G	G	S	T	G	R	I	R	R	S	E	G	G	I	A	W	G	D	M	R	N	C	L	N	Q	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	P	S	V	A
Query Conservation																				.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																							.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		I	I	F	S	G	G	T	G	T	P	K	L	L	D	G	L	K	E	I	L	P	E	E	E	L	T	V	V	V	N	T	A	E	D	L	W	V	S	G	N	L	I	.	.	.	.	.	.	.	S	P	D	L	D	T	V	L	Y	L	F	S	D	Q	I	D	R	K	R	W	W	G	I	E	N	D	T	F	G	T	Y
Template Known Secondary structure							T	T	T									T	T	T	S		G	G	G								T	T					T	T				.	.	.	.	.	.	.											T	T	T		B		T	T	T	T	S	S	B	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		S	A	M	F	E	Y	R	F	G	G	N	G	E	L	S	G	H	N	L	.	G	N	L	M	L	K	A	L	D	H	L	S	V	R	P	L	E	A	I	N	L	I	R	N	L	L	K	V	D	T	H	L	I	P	M	S	E	H	P	V	D	L	M	A	I	D	D	Q	G	H	E	V	Y	G	E	V	N	I	D	Q
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		E	R	X	K	E	L	G	I	E	E	G	L	K	L	G	D	R	D	R	A	T	H	I	I	R	S	N	I	I	R	D	G	A	S	L	T	D	S	T	V	K	L	S	S	L	F	G	I	K	A	N	I	L	P	X	S	D	D	P	V	S	T	Y	I	E	T	A	E	G	I	X	H	F	Q	D	F	W	I	G	K
Template Known Secondary structure								T				S	S																			T	T															T			S					S	B	S	S									T	T									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		157	.	.		160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure					.										.	.
Query SS confidence					.										.	.
Query Sequence		L	T	T	.	P	I	Q	E	L	L	L	T	P	.	.	N	V	P	A	T	R	E	A	V	H	A	I	N	E	A	D	L	I	I	I	G	P	G	S	F	Y	T	S	L	M	P	I	L	L	L	K	E	I	A	Q	A	L	R	R	T	P	A	P	M	V	Y	I	G	N	L	G	R	E	L	S	L	P	A	A	N
Query Conservation					.										.	.
Alig confidence					.										.	.																																														.	.														.
Template Conservation																																																														.	.														.
Template Sequence		R	G	E	P	D	V	R	G	V	D	I	R	G	V	S	E	A	S	I	S	P	K	V	L	E	A	F	E	K	E	E	N	I	L	I	G	P	S	N	P	I	T	S	I	G	P	I	I	S	L	P	G	X	R	E	L	L	K	K	K	.	.	K	V	V	A	V	S	P	I	I	G	N	A	P	.	V	S	G	P
Template Known Secondary structure		T	T		S			S						T	T	T	T			B																		S	S		T	T	T	T							S	T	T						T	T	S	.	.							S			S	S	S		.			S	T
Template Predicted Secondary structure																																																														.	.														.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.
		234	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure					.	.	.	.	.	.	.																											.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.																											.	.	.	.	.
Query Sequence		L	K	L	.	.	.	.	.	.	.	E	S	K	L	A	I	M	E	Q	Y	V	G	K	K	V	I	D	A	V	I	V	G	P	K	V	D	.	.	.	.	.	V	S	A	V	K	E	R	I	V	I	Q	E	V	L	E	A	S	D	I	P	Y	R	H	D	R	Q	L	L	H	N	A	L	E	K	A	L	Q	A	L
Query Conservation					.	.	.	.	.	.	.																											.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.													.														.	.	.	.	.																		.	.	.	.
Template Conservation																								.																																				.	.	.	.
Template Sequence		A	G	K	L	X	P	A	C	G	I	E	V	S	S	X	G	V	A	E	Y	Y	Q	.	D	F	L	D	V	F	V	F	D	E	R	D	R	A	D	E	F	A	F	E	R	L	G	C	H	A	S	R	A	D	T	L	X	T	S	.	.	.	.	T	E	K	S	K	E	L	A	E	I	V	V	Q	A	F	L	E	H
Template Known Secondary structure		T	T	T	T	S	T	T	T	T			S	S							T	T	T	.	T	T								S	S										T	T													S	.	.	.	.
Template Predicted Secondary structure																								.																																				.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions