 |
Job Description | P75767 | Confidence | 26.76% | Date | Thu Jan 5 12:13:55 GMT 2012 |
Rank | 323 | Aligned Residues | 45 |
% Identity | 18% | Template | c1ldbA_ |
PDB info |
PDB header:oxidoreductase(choh(d)-nad(a)) | Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; |
PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase
|
Resolution | 2.80 Å |
|
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
. | . | . | . | . | . | 220 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | A | I | N | E | A | D | L | I | I | I | G | P | G | S | F | Y | T | S | L | M | P | I | L | L | L | K | E | I | A | Q | A | L | R | R | T | . |
. |
P | A | P | M | V | Y | I | G | N |
Query Conservation |   |
  |
|
|   |   |
|
|   |
|
|   |
|
|
|
|   |   |
|
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |
| . | . |   |
|   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |
|
|
Template Sequence |   |
D | D | C | R | D | A | D | L | V | V | I | C | A | G | A | N | D | L | V | D | K | N | I | A | I | F | R | S | I | V | E | S | V | M | A | S | G | F | Q | G | L | F | L | V | A | T | N |
Template Known Secondary structure |   |
G | G |
| S | S |
| S |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|