Job Description P04152 Confidence 100.00% Date Thu Jan 5 10:58:12 GMT 2012 Rank 13 Aligned Residues 231 % Identity 32% Template d1jx4a2 SCOP info DNA/RNA polymerases DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), catalytic domain Resolution 1.70

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		M	F	A	L	C	D	V	N	A	F	Y	A	S	C	E	T	V	F	R	P	D	L	W	G	K	P	V	V	V	L	S	.	.	.	.	.	N	N	D	G	C	V	I	A	R	N	A	E	A	K	A	L	G	V	K	M	G	D	P	W	F	K	Q	K	D	L	F	R	R	C	G	V	V	C	F	S	S	N	Y	E
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.																																		.	.
Template Conservation																																																																							.	.
Template Sequence		I	V	L	F	V	D	F	D	Y	F	Y	A	Q	V	E	E	V	L	N	P	S	L	K	G	K	P	V	V	V	C	V	F	S	G	R	F	E	D	S	G	A	V	A	T	A	N	Y	E	A	R	K	F	G	V	K	A	G	I	P	I	V	E	A	K	K	I	L	P	N	.	.	A	V	Y	L	P	X	R	K	E
Template Known Secondary structure									T	T											G	G	G	T	T	S									S	S	S	T	T													T	T	T			T	T	S	B									T	T	.	.	S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		L	Y	A	D	M	S	N	R	V	M	S	T	L	E	E	L	S	P	R	V	E	I	Y	S	I	D	E	A	F	C	D	L	T	G	V	R	N	C	R	D	.	L	T	D	F	G	R	E	I	R	A	T	V	L	Q	R	T	H	L	T	V	G	V	G	I	A	Q	T	K	T	L	A	K	L	A	N	H	A	A	K
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		V	Y	Q	Q	V	S	S	R	I	X	N	L	L	R	E	Y	S	E	K	I	E	I	A	S	I	D	E	A	Y	L	D	I	S	D	K	V	R	D	Y	R	E	A	Y	N	L	G	L	E	I	K	N	K	I	L	E	K	E	K	I	T	V	T	V	G	I	S	K	N	K	V	F	A	K	I	A	A	D	X	A	K
Template Known Secondary structure															T	T	T		S							T	T							T	T	T		S	S																													S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		K	W	Q	R	Q	T	G	G	V	V	D	L	S	N	L	E	R	Q	R	K	L	M	S	A	L	P	V	D	D	V	W	G	I	G	R	R	I	S	K	K	L	D	A	M	G	I	K	T	V	L	D	L	A	D	T	D	I	R	F	I	R	K	H	F	N	V	V	.	L	E	R	T	V	R	E	L	R	G	E	P
Query Conservation																																																																					.
Alig confidence					.	.	.	.	.	.																																																											.
Template Conservation					.	.	.	.	.	.
Template Sequence		P	N	G	.	.	.	.	.	.	I	K	V	I	D	D	E	E	V	K	R	L	I	R	E	L	D	I	A	D	V	P	G	I	G	N	I	T	A	E	K	L	K	K	L	G	I	N	K	L	V	D	T	L	S	I	E	F	D	K	L	K	G	X	I	G	E	A	K	A	K	Y	L	I	S	L	A	R	D	E	Y
Template Known Secondary structure		S	S		.	.	.	.	.	.																S	B	G	G	G	S	T	T											T	T	T			B	G	G	G	G	G	S	S																						T	T
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		234	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	Q	L	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	P	I	R	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions