Return to main results Retrieve Phyre Job Id

Job DescriptionP04152
Confidence58.15%DateThu Jan 5 10:58:12 GMT 2012
Rank75Aligned Residues47
% Identity19%Templatec1dgsB_
PDB info PDB header:ligaseChain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190......... 200.........210....... .. 220.........
Predicted Secondary structure 






.





...
Query SS confidence 
















.

















. .

.









Query Sequence  DVWGIGRRISKKLDAMG. IKTVLDLADTDIRFIRKH. . FN. VVLERTVREL
Query Conservation   
 


      
   
.
 




  

   
  
..

.     
   
Alig confidence 
















.

















..

.









Template Conservation 

 


   
  
   
 
    


 
    
  
 
 
 


 

   
Template Sequence  DIEGLGEKLIERLLEKGLVRDVADLYHLRKEDLLGLERMGEKSAQNLLRQI
Template Known Secondary structure 

TT

TS
SSGGGGTT


TTSS

SS
Template Predicted Secondary structure 




















Template SS confidence 


















































   2445....2450.........2460.........2470.........2480.........2490.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions