Job Description P57998 Confidence 96.45% Date Thu Jan 5 12:06:30 GMT 2012 Rank 12 Aligned Residues 118 % Identity 14% Template d1c6va_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain Resolution 3.00

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		S	D	V	I	V	C	A	E	M	D	E	Q	W	G	Y	V	G	A	K	S	R	Q	R	W	L	F	Y	A	Y	D	R	L	R	K	T	V	V	A	H	V	F	G	E	R	T	M	A	T	L	G	R	L	M	S	L	L	.	S	P	F	D	V	V	I	W	M	T	D	G	W	P	L	Y	E	S	R	L	K	G	K
Query Conservation																																																										.
Alig confidence													.	.							.	.	.	.																																		.
Template Conservation													.	.							.	.	.	.
Template Sequence		N	S	D	L	G	T	W	Q	M	D	C	.	.	T	H	L	E	G	K	.	.	.	.	I	V	I	V	A	V	H	V	A	S	G	F	I	E	A	E	V	I	P	Q	E	T	G	R	Q	T	A	L	F	L	L	K	L	A	G	R	W	P	I	T	H	L	H	T	D	N	G	A	N	F	A	S	Q	E	V	K	M
Template Known Secondary structure					T	T							.	.				T	T		.	.	.	.								T	T	S									S	S		S													T	T	S											S	S	T	T	S	S
Template Predicted Secondary structure													.	.							.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	V	I	S	K	R	Y	T	Q	R	I	E	R	Y	N	L	N	L	R	Q	H	L	A	R	L	G	R	K	S	L	S	F	S	K	S	V	E	L	H	D	K	V	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	W	W	A	G	I	E	H	T	F	G	E	A	M	N	H	H	L	K	N	Q	I	D	R	I	R	E	Q	A	N	S	V	E	T	I	V	L	M	A	V	H	C	M	N
Template Known Secondary structure							T									T	T	T								T	T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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