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Job DescriptionP57998
Confidence96.89%DateThu Jan 5 12:06:30 GMT 2012
Rank7Aligned Residues114
% Identity17%Templatec3nf9A_
PDB info PDB header:hydrolase/hydrolase inhibitorChain: A: PDB Molecule:integrase; PDBTitle: structural basis for a new mechanism of inhibition of hiv integrase2 identified by fragment screening and structure based design
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  CAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLL. SPFDVVIWMTDGWPLYESRL. . . . . . . K
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Template Sequence  IWQLDC. . THLEGK. . . . VILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAACWWA
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Query Sequence  GKLHVISKRYTQR. . . . IERYNLNLRQHLARLGRKSLSFSKSVELHDKVIGH
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Template Sequence  GIKQEDGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNH
Template Known Secondary structure  T




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   134.....140.........150.........160.........170.........180.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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