Job Description P57998 Confidence 4.19% Date Thu Jan 5 12:06:30 GMT 2012 Rank 69 Aligned Residues 61 % Identity 11% Template c2vx8D_ PDB info PDB header:endocytosis,exocytosis Chain: D: PDB Molecule:nucleoporin-like protein rip, vesicle-associated PDBTitle: vamp7 longin domain hrb peptide complex Resolution 2.2 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																			.	.	.	.	.																										.
Query SS confidence																			.	.	.	.	.																										.
Query Sequence		E	M	D	E	Q	W	G	Y	V	G	A	K	S	R	Q	R	W	.	.	.	.	.	L	F	Y	A	Y	D	R	L	R	K	T	V	V	A	H	V	F	G	E	R	T	M	A	T	L	.	G	R	L	M	S	L	L	S	P	F	D	V	V	I	W	M	T	D	G
Query Conservation																			.	.	.	.	.																										.
Alig confidence																			.	.	.	.	.																										.
Template Conservation
Template Sequence		E	V	K	P	L	K	S	L	L	G	D	S	A	P	T	L	H	L	G	M	A	I	L	F	A	V	V	A	R	G	T	T	I	L	A	K	H	A	W	C	G	G	N	F	L	E	V	T	E	Q	I	L	A	K	I	P	S	E	N	N	K	L	T	Y	S	H	G
Template Known Secondary structure						T						T	T									S									T	T								S	S		S													S		S	S	S								T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions