Job Description P0AFF0 Confidence 8.00% Date Thu Jan 5 11:26:04 GMT 2012 Rank 8 Aligned Residues 80 % Identity 10% Template d1fftb2 SCOP info Transmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Resolution 3.50

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Show / Hide Conservation and Alignment quality

		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		G	V	Q	A	H	L	W	W	L	V	G	A	V	V	V	G	S	A	I	G	L	Y	Y	Y	L	R	V	A	V	S	L	Y	L	H	A	P	E	Q	P	G	R	.	D	A	P	S	N	W	Q	Y	S	A	G	G	I	V	V	L	I	S	A	L	L	V	L	V	L	G	V	W	P	Q	P	L	I	S	I	V	R	L
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		G	L	E	Q	R	S	L	I	L	T	A	F	G	L	M	L	I	V	V	I	P	A	I	L	M	A	V	G	F	A	W	K	Y	R	A	S	N	K	D	A	K	Y	S	P	N	W	S	H	S	N	K	V	E	A	V	V	W	T	V	P	I	L	I	I	I	F	L	A	V	L	T	W	K	T	T	H	A	L	E	P
Template Known Secondary structure																T	T	T	T	T	T								T	T	T	T	T	T	T	T	S	T	T	T		S	S								S						T	T																		S		T	T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		481
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		117

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions