Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFF0
Confidence4.13%DateThu Jan 5 11:26:04 GMT 2012
Rank37Aligned Residues17
% Identity18%Templatec2k58B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:neuronal acetylcholine receptor subunit beta-2; PDBTitle: nmr structures of the first transmembrane domain of the2 neuronal acetylcholine receptor beta 2 subunit
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   375....380...... ...390.
Predicted Secondary structure 


..
Query SS confidence 











. .




Query Sequence  VMTVMMLSLAGI. . PMTLG
Query Conservation     
  


 
 ..

  
Alig confidence 











..




Template Conservation 
 


 
  
 
 

  

Template Sequence  CVLITSLAILVFYLPSDCG
Template Known Secondary structure 


S

Template Predicted Secondary structure 





Template SS confidence 


















   15....20.........30...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions