Job Description P76423 Confidence 100.00% Date Thu Jan 5 12:22:57 GMT 2012 Rank 4 Aligned Residues 241 % Identity 33% Template c3nm3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		D	L	L	G	S	A	Q	S	A	H	A	L	H	L	F	H	Q	H	S	P	L	V	H	C	M	T	N	D	V	V	Q	T	F	T	A	N	T	L	L	A	L	G	A	S	P	A	M	V	I	E	T	E	E	A	S	Q	F	A	A	I	A	S	A	.	L	L	I	N	V	G	T	L	T	Q	P	R	A	Q	A	M
Query Conservation																																																																	.
Alig confidence																																																																	.												.	.
Template Conservation																																																																													.	.
Template Sequence		S	L	T	T	T	D	E	I	Q	S	I	I	S	N	T	L	K	A	R	P	L	V	Q	H	I	T	N	K	V	H	Q	N	F	G	A	N	V	T	L	A	L	G	S	S	P	I	M	S	E	I	Q	S	E	V	N	D	L	A	A	I	P	H	A	T	L	L	L	N	T	G	S	V	A	P	P	.	.	E	M	L
Template Known Secondary structure		S																	S																							T	T									T	T	T					T	T	S	T	T							S	S		S	S			.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		R	A	A	V	E	Q	A	K	S	S	Q	T	P	W	T	L	D	P	V	A	V	G	A	L	D	Y	R	R	H	F	C	H	E	L	L	S	.	F	K	P	A	A	I	R	G	N	A	S	E	I	M	A	L	A	G	I	A	N	G	G	R	G	V	D	T	T	D	A	A	A	N	A	I	P	A	A	Q	T	L	A
Query Conservation																																						.
Alig confidence																					.	.																.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	A	I	R	A	Y	N	D	V	K	R	P	I	V	F	D	P	V	.	.	G	A	T	E	T	R	L	L	L	N	N	K	L	L	T	F	G	Q	F	S	C	I	K	G	N	S	S	E	I	L	G	L	A	E	L	S	N	.	.	.	.	.	.	.	.	.	.	.	E	L	L	I	Q	A	T	K	I	V	A
Template Known Secondary structure											T	T									.	.														T	T	S	S			S														T				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.												380	.	.	.	.	.	.	.	.	.	390
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.												.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Query Sequence		R	E	T	G	A	I	V	V	V	T	G	E	M	D	Y	V	T	D	G	H	.	.	.	.	.	.	.	.	.	.	.	R	I	I	G	I	H	G	G	D	P	L	M	T	K	V	V	G	T	G	C	A	L	S	A	V	V	A	A	C	C	A	L	P	G	.	.	.	D	T	L	E	N	V	A	S	A	C	H	W
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation
Template Sequence		F	K	Y	K	T	V	A	V	C	T	G	E	F	D	F	I	A	D	G	T	I	E	G	K	Y	S	L	S	K	G	T	N	G	T	S	V	E	D	I	P	C	V	A	V	E	A	G	P	I	G	C	S	L	G	S	T	I	A	C	M	I	G	G	Q	P	S	E	G	N	L	F	H	A	V	V	A	G	V	M	L
Template Known Secondary structure				T	T	S						S	S	S								G	G	G	B			S	S	S		S	S	S			G	G	G	S						B																					T	T
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	Q	A	G	E	R	A	V	A	R	S	E	G	P	G	S	F	V	P	H	F	L	D	A	L	W	Q	L	T	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	A	A	G	K	I	A	S	E	K	C	N	G	S	G	S	F	Q	V	E	L	I	D	A	L	Y	R	L	T	R	E
Template Known Secondary structure														S	S																		S
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions