Job Description P76423 Confidence 99.87% Date Thu Jan 5 12:22:57 GMT 2012 Rank 12 Aligned Residues 180 % Identity 16% Template c3mbjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative phosphomethylpyrimidine kinase; PDBTitle: crystal structure of a putative phosphomethylpyrimidine kinase2 (bt_4458) from bacteroides thetaiotaomicron vpi-5482 at 2.10 a3 resolution (rhombohedral form) Resolution 2.10 Å

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		68	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure									.																																					.	.	.	.	.	.
Query SS confidence									.																																					.	.	.	.	.	.
Query Sequence		L	I	N	V	G	T	L	.	T	Q	P	R	A	Q	A	M	R	A	A	V	E	Q	A	K	S	S	Q	T	P	W	T	L	D	P	V	A	V	G	A	L	D	Y	R	R	.	.	.	.	.	.	H	F	C	H	E	L	L	S	F	K	P	A	A	I	R	G	N	A	S	E	I	M	A	L	A	G	I	A	N	G
Query Conservation									.																																					.	.	.	.	.	.
Alig confidence									.																																					.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	Y	T	G	Y	L	G	S	P	R	Q	I	Q	I	V	S	D	F	I	K	D	F	R	Q	P	D	S	L	I	V	A	D	P	V	L	G	D	N	G	R	L	Y	T	N	F	D	X	E	X	V	K	E	X	R	H	L	I	T	K	A	D	V	I	T	P	N	L	T	E	L	F	Y	L	L	D	E	P	Y	K
Template Known Secondary structure										S																	T	T												T	T				T	T														T	T		S					B									T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.									.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		G	R	G	V	D	T	T	D	A	A	A	N	A	I	P	A	A	Q	T	L	A	R	E	T	G	A	I	V	V	V	T	G	E	.	.	.	.	.	.	.	.	M	D	Y	V	T	D	G	H	R	I	I	G	I	H	G	G	D	P	L	M	T	K	V	V	G	T	G	C	A	L	S	A	V	V	A	A	C	C	A
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																											.	.	.	.	.	.	.	.																				.
Template Conservation				.	.	.	.	.																																																						.
Template Sequence		A	D	.	.	.	.	.	S	T	D	E	E	L	K	E	Y	L	R	L	L	S	D	K	G	P	Q	V	V	I	I	T	S	V	P	V	H	H	K	T	S	V	Y	A	Y	N	R	Q	G	N	R	Y	W	K	V	T	C	P	Y	L	P	.	A	H	Y	P	G	T	G	D	T	F	T	S	V	I	T	G	S	L	X
Template Known Secondary structure		S		.	.	.	.	.															T	T	S		S																				T	T	T	T											S	.				T	T
Template Predicted Secondary structure				.	.	.	.	.																																																						.
Template SS confidence
		159	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		L	P	G	D	T	L	E	N	V	A	S	A	C	H	W	M	K	Q	A	G	E	R	A	V	A	R	S	E	.	.	G	P	G	S	F	V	P	H	F	L	D	A	L
Query Conservation																														.	.
Alig confidence																														.	.
Template Conservation
Template Sequence		Q	G	D	S	L	P	X	A	L	D	R	A	T	Q	F	I	L	Q	G	I	R	A	T	F	G	Y	E	Y	D	N	R	E	G	I	L	L	E	K	V	L	H	N	L
Template Known Secondary structure		T	T																							T	S				G	G	G								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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