Job Description P76423 Confidence 99.94% Date Thu Jan 5 12:22:57 GMT 2012 Rank 10 Aligned Residues 174 % Identity 15% Template c3k5wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbohydrate kinase; PDBTitle: crystal structure of a carbohydrate kinase (yjef family)from2 helicobacter pylori Resolution 2.60 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	S	A	L	L	I	N	V	G	T	L	T	Q	P	R	A	Q	A	M	R	A	A	V	E	Q	A	K	S	S	Q	T	P	W	T	L	D	P	V	A	V	G	A	L	D	Y	R	R	H	F	C	H	E	L	L	S	F	K	P	A	A	I	R	G	N	A	S	E	I	M	A	L	A	G	I	A	N	G	G
Query Conservation
Alig confidence																											.	.	.	.	.	.	.																				.	.	.	.	.	.																					.	.	.
Template Conservation																											.	.	.	.	.	.	.																				.	.	.	.	.	.																					.	.	.
Template Sequence		N	L	L	S	A	F	A	L	G	X	G	L	E	N	I	P	K	D	F	N	R	W	L	E	L	.	.	.	.	.	.	.	A	P	C	V	L	D	A	G	V	F	Y	H	K	E	I	L	Q	A	L	.	.	.	.	.	.	E	K	E	A	V	L	T	P	H	P	K	E	F	L	S	L	L	N	L	V	.	.	.
Template Known Secondary structure		S	S		S						T	T		S	S			T	T								.	.	.	.	.	.	.	S						G	G	G	G	G	S	G	G	G	G	T	T	T	.	.	.	.	.	.	T	S	S																	T	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.																				.	.	.	.	.	.																					.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.								.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.							.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		R	G	V	D	T	T	D	A	A	A	N	A	I	P	A	A	Q	T	L	A	R	E	T	.	G	A	I	V	V	V	T	G	E	M	D	Y	V	T	D	G	H	R	I	I	G	I	H	G	G	D	P	L	M	T	K	V	V	G	T	G	C	A	L	S	A	V	V	A	A	C	C	A	L	P	G	D	T	L	E	N
Query Conservation																									.
Alig confidence		.																							.																																.
Template Conservation		.																																																							.
Template Sequence		.	G	I	N	I	S	X	L	E	L	L	D	N	K	L	A	R	D	F	S	Q	K	Y	P	K	V	V	L	L	L	K	G	A	N	T	L	I	A	H	Q	G	Q	V	F	I	N	I	L	G	S	V	A	L	A	K	.	A	G	S	G	D	V	L	A	G	L	I	L	S	L	L	S	Q	N	Y	T	P	L	D	A
Template Known Secondary structure		.	S					T	T	S	G	G	G	S											T	T							S	S	S						T	T										G	G	G		S	.	T	T															T	T
Template Predicted Secondary structure		.																																																							.
Template SS confidence
			354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	S	A	C	H	W	M	K	Q	A	G	E	R	A	V	A	R	S	E	G	P	G	S	F	V	P	H	F	L	D	A	L	W	Q	L
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		A	I	N	A	S	L	A	H	A	L	A	S	L	E	F	.	.	.	K	N	N	Y	A	L	T	P	L	D	L	I	E	K	I	K	Q	L
Template Known Secondary structure												G	G	G	G		.	.	.	S	S	T	T													T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.				.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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