Return to main results Retrieve Phyre Job Id

Job DescriptionP76423
Confidence29.69%DateThu Jan 5 12:22:57 GMT 2012
Rank165Aligned Residues82
% Identity23%Templatec3fozB_
PDB info PDB header:transferase/rnaChain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate transferase; PDBTitle: structure of e. coli isopentenyl-trna transferase in complex with e.2 coli trna(phe)
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110...... ...120..... ....130... ......140.........150........
Predicted Secondary structure 






...........




..

....









Query SS confidence 




















. . . . . . . . . . .








. .







. . . .
























Query Sequence  WTLDPVAVGALDYRRHFCHEL. . . . . . . . . . . LSFKPAAIR. . GNASEIMA. . . . LAGIANGGRGVDTTDAAANAIPAAQ
Query Conservation 






  

  
      
...........
     


..

  
   ....
 
      


           
 
Alig confidence 




















...........








..







....
























Template Conservation   
 







 


 

    







 



 







   
   






     
 


  
   
   
 
Template Sequence  FLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMA
Template Known Secondary structure 

SSS
TTTS


SSTTBTT

TTTT


TTS
SSS
B
TTS


Template Predicted Secondary structure 
































Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   159160.........170.......
Predicted Secondary structure 






Query SS confidence 


















Query Sequence  TLARETGAIVVVTGEMDYV
Query Conservation   

     

   
  
 
Alig confidence 


















Template Conservation   
  

  







 

Template Sequence  DITAAGRIPLLVGGTMLYF
Template Known Secondary structure  TT
S
Template Predicted Secondary structure 





Template SS confidence 


















   94.....100.........110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions