Job Description P76423 Confidence 37.82% Date Thu Jan 5 12:22:57 GMT 2012 Rank 130 Aligned Residues 72 % Identity 22% Template c3fijD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.																		.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																															.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	L	V	H	C	M	T	N	D	V	V	Q	T	F	T	A	N	T	L	L	A	L	G	A	S	P	A	M	.	.	V	I	E	T	E	E	A	S	Q	F	A	A	I	A	S	A	L	L	I	N	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	T	Q	P	R	A	Q	A	M
Query Conservation																															.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		K	P	V	I	G	I	T	G	Q	.	.	.	.	Q	R	Y	V	D	A	I	Q	K	V	G	G	F	P	I	A	L	P	I	D	D	P	S	T	A	V	Q	A	I	S	L	V	D	G	L	L	L	T	G	G	Q	D	I	T	P	Q	L	Y	L	E	E	P	S	Q	E	I	G	A	Y	F	P	P	R	D	S	Y	E
Template Known Secondary structure											.	.	.	.										T	T											G	G	G							T		S								S				G	G	G	G	T					T	T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	V	E	Q	A	K	S	S	Q	T	P	W	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	L	V	R	A	A	L	D	A	G	K	P	I	F
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions