 |
Job Description | P76423 | Confidence | 78.25% | Date | Thu Jan 5 12:22:57 GMT 2012 |
Rank | 73 | Aligned Residues | 101 |
% Identity | 22% | Template | c2vp8A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:dihydropteroate synthase 2; |
PDBTitle: structure of mycobacterium tuberculosis rv1207
|
Resolution | 2.64 Å |
|
 |
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
70 | . | . | . | . | . | |
|
|
|
. | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . | . |  |
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
H | A | L | H | L | F | H | Q | H | S | P | . |
L | V | H | C | M | T | N | D | V | V | Q | T | F | T | A | N | T | L | L | A | L | G | A | S | P | A | M | . |
. |
. |
V | I | E | T | E | E | A | S | Q | F | A | A | I | A | S | A | L | L | I | . |
. |
. |
N | V | G | T | L | T | . |
. |
. |
. |
Q | P | R | A | Q | A |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |
| . |
|
|
|   |
|
|
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|
|   |
| . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|
|
| . | . | . |
|   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
| . | . |
|   |   |   |   |
|   |
|
|
|
|   |   |
|   |   |
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |
|
|
|   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | F | I | E | W | L | R | G | A | Y | P | D | Q | L | I | S | V | D | . |
. |
T | W | R | A | Q | V | A | K | A | A | C | A | A | G | A | D | L | I | N | D | T | W | G | G | V | D | P | A | M | P | E | V | A | A | E | F | G | A | G | L | V | C | A | H | T | Y | G | T | T | T | R | G | V | V | D | A | V | I | S | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  |  | . | . |
| S |
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  | T | T | S | S | S | S | T | T |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
|
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | A | A | V | E | Q | A | K | S | S | Q | T | P | . |
. |
. |
W | T | L | D | P | V | A | V | G | A | L | D | Y | R | R | H | F | C | H | E | L |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |
|
| . | . | . |
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|
| . |
|
|
|
|
|
|   |   |   |   |
|
|   |   |
|
Template Sequence |   |
V | T | A | A | A | E | R | A | V | A | A | G | V | A | R | E | K | V | L | I | D | P | . |
A | H | D | F | G | K | N | T | F | H | G | L | L | L | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  | T | . | T | T | T |
|
| T | T | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|