Return to main results Retrieve Phyre Job Id

Job DescriptionP76423
Confidence50.47%DateThu Jan 5 12:22:57 GMT 2012
Rank109Aligned Residues77
% Identity14%Templatec1w25B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:stalked-cell differentiation controlling protein; PDBTitle: response regulator pled in complex with c-digmp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22....... 30.........40.........50.........60... ......70.........80.........90........
Predicted Secondary structure 



.










..










Query SS confidence 







.

































. .


































Query Sequence  SPLVHCMT. NDVVQTFTANTLLALGASPAMVIETEEASQFAAI. . ASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTL
Query Conservation   



 

.
 
     

  

 



 
     
  
    ..
 




 
            
   
    




Alig confidence 







.

































..


































Template Conservation 
 






       
   
   
  
  
    


        



 
  

  

      

        


 
Template Sequence  SARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVL
Template Known Secondary structure 


SSTTTT
SS

SS

SSS
STTTTTS
Template Predicted Secondary structure 




























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions