Job Description P39369 Confidence 98.40% Date Thu Jan 5 12:00:01 GMT 2012 Rank 21 Aligned Residues 143 % Identity 15% Template d2o8ra3 SCOP info Phospholipase D/nuclease Phospholipase D/nuclease Polyphosphate kinase C-terminal domain Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		S	T	L	H	G	V	E	Q	H	D	E	F	L	N	K	T	L	A	G	A	Q	K	K	I	T	I	I	S	P	W	L	S	W	Q	K	V	.	E	Q	T	G	F	L	A	S	M	A	L	A	R	S	R	G	I	D	I	T	V	V	T	D	K	N	C	N	I	A	H	V	D	D	D	K	R	Q	E	K	Q	H	L
Query Conservation																																						.
Alig confidence																																						.																														.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		Y	L	I	H	V	P	Y	Y	T	Y	D	Y	V	V	R	L	L	X	E	A	A	I	S	P	D	V	S	E	I	R	L	T	Q	Y	R	V	A	E	N	S	S	I	I	S	A	L	E	A	A	A	Q	S	G	K	K	V	S	V	F	V	E	L	K	A	R	F	.	.	.	.	.	.	N	L	R	L	S	E	R	X
Template Known Secondary structure							T	T	B		S												T		T	T									S				S														T	T											S			.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.							.	410	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.							.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																														.	.	.	.	.	.				.	.	.
Query SS confidence																														.	.	.	.	.	.				.	.	.
Query Sequence		L	N	D	A	V	E	K	L	N	K	M	G	I	A	T	K	L	V	N	R	V	H	S	K	I	V	I	E	.	.	.	.	.	.	D	E	E	.	.	.	L	L	C	V	G	S	F	N	W	F	S	A	T	R	E	D	K	Y	Q	R	Y	D	T	S	L	V	Y	R	G	E	G	V	K	N	E	I	K	A	I	Y
Query Conservation																														.	.	.	.	.	.				.	.	.
Alig confidence																.	.	.	.	.										.	.	.	.	.	.				.	.	.										.	.	.
Template Conservation																.	.	.	.	.																															.	.	.
Template Sequence		R	R	S	G	I	R	I	V	Y	S	X	P	G	L	.	.	.	.	.	K	V	H	A	K	T	A	L	I	L	Y	H	T	P	A	G	E	R	P	Q	G	I	A	L	L	S	T	G	N	F	.	.	.	N	E	T	T	A	R	I	Y	S	D	T	T	L	X	T	A	N	T	D	I	V	H	D	V	Y	R	L	F
Template Known Secondary structure					T								T	T		.	.	.	.	.															S	S	S										S	S		S	.	.	.	S				S	S
Template Predicted Secondary structure																.	.	.	.	.																															.	.	.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.						.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.				.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		331	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	L	D	Q	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	L	D	G	D	P
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions