Return to main results Retrieve Phyre Job Id

Job DescriptionP39369
Confidence99.80%DateThu Jan 5 12:00:01 GMT 2012
Rank8Aligned Residues140
% Identity22%Templated1xdpa3
SCOP infoPhospholipase D/nuclease Phospholipase D/nuclease Polyphosphate kinase C-terminal domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190.........200.. .......210......... 220.........230.........240.........250.....
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Query Sequence  TLHGVEQHDEFLNKTLAGAQK. . . . . KITIISPWLSWQKVEQT. GFLASMALARSRGIDITVVTDKNCNIAHVDDDKRQE
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Template Sequence  LLYYPYHTFEHVLELLRQASFDPSVLAIKI. NIYR. . . . VAKDSRIIDSMIHAAHNGKKVTVVVELQAR. . FDEEANIHW
Template Known Secondary structure  TTB
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TT
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   342.......350.........360.........370. .... ....380.........390.........400..... ....410....
 
   256...260...... ...270.........280.........290 .........300.........310.........320.......
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Query Sequence  KQHLLNDAVEK. LNKMGIATKLVNRVHSKIVIEDEE. . . . . . . LLCVGSFNWFSATREDKYQRYDTSLVYRGEGVKNEIK
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Template Sequence  AKRLTEAGVHVIFSAPGLK. . . . . . IHAKLFLISRKENGEVVRYAHIGTGNF. . . NEKTARLYTDYSLLTADARITNEVR
Template Known Secondary structure  TT


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   415....420.........430... ......440.........450.........460 .........470.........480.....
 
   328.330.......
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Query Sequence  AIYGSLDQRQ
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Template Sequence  RVFNFIENPY
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TT
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   486...490.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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