Job Description P39369 Confidence 20.86% Date Thu Jan 5 12:00:01 GMT 2012 Rank 50 Aligned Residues 81 % Identity 19% Template d1qzqa1 SCOP info Phospholipase D/nuclease Phospholipase D/nuclease Tyrosyl-DNA phosphodiesterase TDP1 Resolution 2.40

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		191	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		E	F	L	N	K	T	L	A	G	A	.	.	Q	K	K	I	T	I	I	S	P	W	L	S	W	Q	K	V	E	Q	T	G	F	L	A	S	M	A	L	A	R	S	R	G	I	D	I	T	V	V	T	D	K	N	C	N	I	A	H	V	D	D	D	K	R	Q	E	K	Q	H	L	L	N	D	A	V	E	K	L	N
Query Conservation												.	.
Alig confidence												.	.									.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	W	L	V	K	Q	Y	P	P	E	F	R	K	K	P	I	L	L	V	H	.	.	.	.	.	.	.	G	D	K	R	E	A	K	A	H	L	H	A	Q	A	K	P	Y	E	N	I	S	L	C	Q	A	K	L	D	I	A	F	G	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S		G	G	G	T	T	S							.	.	.	.	.	.	.															T	T		T	T										S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.								.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		K	M	G	I	A	T	K	L	V	N	R	V	H	S	K	I	V	I	.	.	.	E	D	E	E	L	L	C	V	G	S	F	N	W	F	S	A	T	R	E	D	K	Y	Q
Query Conservation																				.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	H	T	K	M	M	L	L	L	Y	E	E	G	L	R	V	V	I	H	T	S	N	L	I	H	A	D	W	H	Q	K	T	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.										S	S											B	S	G	G	G	G	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions