Job Description P39369 Confidence 57.90% Date Thu Jan 5 12:00:01 GMT 2012 Rank 43 Aligned Residues 72 % Identity 17% Template d1jy1a1 SCOP info Phospholipase D/nuclease Phospholipase D/nuclease Tyrosyl-DNA phosphodiesterase TDP1 Resolution 1.69

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		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		R	G	I	D	I	T	V	V	T	D	K	N	C	N	I	A	H	V	D	D	D	K	R	Q	E	K	Q	H	L	L	N	D	A	V	E	K	L	N	K	M	G	I	A	T	K	L	V	N	R	V	H	S	K	I	V	I	.	.	.	E	D	E	E	L	L	C	V	G	S	F	N	W	F	S	A	T	R	E	D	K
Query Conservation																																																										.	.	.
Alig confidence													.	.	.	.	.	.																												.												.	.	.
Template Conservation													.	.	.	.	.	.																												.
Template Sequence		R	K	K	P	I	L	L	V	H	G	D	.	.	.	.	.	.	K	R	E	A	K	A	H	L	H	A	Q	A	K	P	Y	E	N	I	S	L	C	Q	A	K	L	D	I	.	A	F	G	T	H	H	T	K	X	X	L	L	L	Y	E	E	G	L	R	V	V	I	H	T	S	N	L	I	H	A	D	W	H	Q	K
Template Known Secondary structure		T	T	S									.	.	.	.	.	.													T	T		T	T										S	.	T	T													S	S											B	S	G	G	G	G	T	S	S
Template Predicted Secondary structure													.	.	.	.	.	.																												.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		308	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		293	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions